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#include "gmxapi/md.h"

#include <memory>

#include "gromacs/mdtypes/state.h"
#include "gromacs/utility/keyvaluetree.h"

#include "gmxapi/gmxapi.h"
#include "gmxapi/md/mdmodule.h"

#include "md_impl.h"

namespace gmxapi
{

const char* MDHolder::api_name = MDHolder_Name;

//! \cond internal
class MDWorkSpec::Impl
{
public:
    /*!
     * \brief container of objects glued together by the client.
     *
     * Note that the client can't be trusted to keep alive or destroy these,
     * and we do not yet have sufficient abstraction layers to allow the
     * client to interact asynchronously with code supporting MD simulation
     * through truly separate handles to the underlying objects, so ownership
     * is amongst the collaborators of the gmxapi::MDModule.
     * \todo Pass factory function objects instead of shared handles.
     * \todo Consolidate MDWorkSpec and gmxapi::Workflow under new Context umbrella.
     */
    std::vector<std::shared_ptr<gmxapi::MDModule>> modules;
};
//! \endcond

MDWorkSpec::MDWorkSpec() : impl_{ std::make_unique<Impl>() }
{
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
}

void MDWorkSpec::addModule(std::shared_ptr<gmxapi::MDModule> module)
{
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
    impl_->modules.emplace_back(std::move(module));
}

std::vector<std::shared_ptr<gmxapi::MDModule>>& MDWorkSpec::getModules()
{
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
    return impl_->modules;
}

MDWorkSpec::~MDWorkSpec() = default;

std::shared_ptr<::gmxapi::MDWorkSpec> MDHolder::getSpec()
{
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
    GMX_ASSERT(impl_->spec_, "Expected non-null work specification.");
    return impl_->spec_;
}

std::shared_ptr<const ::gmxapi::MDWorkSpec> MDHolder::getSpec() const
{
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
    GMX_ASSERT(impl_->spec_, "Expected non-null work specification.");
    return impl_->spec_;
}

MDHolder::MDHolder() : MDHolder{ std::make_shared<MDWorkSpec>() }
{
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
    GMX_ASSERT(impl_->spec_, "Expected non-null work specification.");
}

MDHolder::MDHolder(std::shared_ptr<MDWorkSpec> spec) :
    impl_(std::make_shared<MDHolder::Impl>(std::move(spec)))
{
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
    GMX_ASSERT(impl_->spec_, "Expected non-null work specification.");
}

MDHolder::Impl::Impl(std::shared_ptr<MDWorkSpec>&& spec) : spec_{ spec }
{
    GMX_ASSERT(spec_, "Expected non-null work specification.");
}

MDHolder::MDHolder(std::string name) : MDHolder{}
{
    name_ = std::move(name);
    GMX_ASSERT(impl_, "Expected non-null implementation object.");
    GMX_ASSERT(impl_->spec_, "Expected non-null work specification.");
}

std::string MDHolder::name() const
{
    return name_;
}


} // end namespace gmxapi
