#NEXUS 
[MacClade 3.01 registered to Brent D. Mishler, Duke University]

[**The final matrix GP-COMB used in the Ann .Mo. Bot. 81: 451-483 (Mishler et al. 1994)
 green plant synthesis paper.]

BEGIN DATA;
DIMENSIONS  NTAX=59 NCHAR=2289;
FORMAT DATATYPE=DNA MISSING=? GAP=-  INTERLEAVE  SYMBOLS="0 1 2 3 4 5 6 7";
OPTIONS  MSTAXA=UNCERTAIN ;

MATRIX

[                          10        20        30        40        50]
[                          .         .         .         .         .]

Glycine_max       TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAA   [50]
Oryza_sativa      TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAA   [50]
Zamia_pumila      TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTCAGTATGAACTAT   [50]
Psilotum_n        ??????????????????????????????????????????????????   [50]
Equisetum_ar      ??????????????????????????????????????????????????   [50]
Atrichum_angus    ??????????????????????????????????????????????????   [50]
Notothylas_bre    ??????????????????????????????????????????????????   [50]
Phaeoceros_lae    ??????????????????????????????????????????????????   [50]
Porella_pi        ??????????????????????????????????????????????????   [50]
Conocephal_con    ??????????????????????????????????????????????????   [50]
Asterella_tene    ??????????????????????????????????????????????????   [50]
Riccia            ??????????????????????????????????????????????????   [50]
Klebsormid_fla    ??????????????????????????????????????????????????   [50]
Coleochaet_nit    ??????????????????????????????????????????????????   [50]
Fissidens_taxi    ??????????????????????????????????????????????????   [50]
Plagiomnium_cu    ????????????????????????????????TGTGTAAGTATAAACT-C   [49]
Micromonas_pus    ??????????????????????????????????????????????????   [50]
Mantoniel_squa    ??????????????????????????????????????????????????   [50]
Nephroselm_pyr    ??????????????????????????????????????????????????   [50]
Pedinomonas_mi    ??????????????????????????????????????????????????   [50]
Tetraselm_cart    ??????????????????????????????????????????????????   [50]
Enteromorpha      ??????????????????????????????????????????????????   [50]
Ulva_fasci        ??????????????????????????????????????????????????   [50]
Ulothrix_zo       ??????????????????????????????????????????????????   [50]
Cympolia_barba    ??????????????????????????????????????????????????   [50]
Batophora_oers    ??????????????????????????????????????????????????   [50]
Codium_decort     ??????????????????????????????????????????????????   [50]
Cladophoro        ??????????????????????????????????????????????????   [50]
Blastophysa_rh    ??????????????????????????????????????????????????   [50]
Trentepohlia      ??????????????????????????????????????????????????   [50]
Cephaleuro_par    ???????C-TGTCTCAAAGA-TAAGCCATGCATGTCTAAGTATAA---GC   [45]
Characium_vac     TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Dunaliella_par    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Chlamyd_reinha    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Volvox_carteri    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Chlorococc_min    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Draparn_plum      ??????????????????????????????????????????????????   [50]
Uronema_belk      ??????????????????????????????????????????????????   [50]
Chlamydom_moew    ??????????????????????????????????????????????????   [50]
Stephanos_pl      ??????????????????????????????????????????????????   [50]
Carteria_rad      ??????????????????????????????????????????????????   [50]
Gonium_pecto      ??????????????????????????????????????????????????   [50]
Chlorella_kess    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Chlorella_vulg    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Protothec_wic     TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAA--TGG   [48]
Chlorella_prot    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTGAGTATAACCTG-   [49]
Chlorella_min     TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Neochloris_aqu    TCATATGCTTGTCTCAAAGATTAACCCATGCATGTCTAAGTATAAACTGC   [50]
Neochloris_vig    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Pediastrum_dup    TCATATGCTTGTCTCAGAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Scenedesm_obl     TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Characium_hin     TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Chlorella_fus     TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Ankistrodesmus    TCATATGCTTRTCTCAAAGATTAAGCCATGCATGTC?AAGTATAAACTGC   [50]
Pseudotreb_gig    ??????????????????????????????????????????????????   [50]
Pleurastr_terr    ??????????????????????????????????????????????????   [50]
Characium_per     TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Parietochl_pse    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]
Friedmannia_is    TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTATAAACTGC   [50]

[                          60        70        80        90        100]
[                          .         .         .         .         .]

Glycine_max       TTCA-GACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTT   [99]
Oryza_sativa      TTC-GAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTT   [99]
Zamia_pumila      TTT-GGACGGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTCTT   [99]
Psilotum_n        ?????????????????GCGAATGGCTCATTAAATCAGTTATAGTTTCTT   [100]
Equisetum_ar      ?????????????????GCGAATGGCTGATTAAATCAGTTATAGTTTCTT   [100]
Atrichum_angus    ????????????????????????????ATTAAATCAGTTATAGTTTCTT   [100]
Notothylas_bre    ??????????????????????????????????????????????????   [100]
Phaeoceros_lae    ??????????????????????????????????????????????????   [100]
Porella_pi        ????????????????????????????????????????????????TT   [100]
Conocephal_con    ??????????????????????????????????????????????????   [100]
Asterella_tene    ???????CTGTGAAACTGCGAATGGCTC-TTAAATC-GTTATAGTTTCTT   [98]
Riccia            ??????????????????????????????????????????????????   [100]
Klebsormid_fla    ??????????????????????????????????????????????????   [100]
Coleochaet_nit    ??????????????????????TGGCTCATTAAATCAGTTATAGTTT-TT   [99]
Fissidens_taxi    ?????????????????????????????????????GTTATAGTTTCTT   [100]
Plagiomnium_cu    TTTTGTACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTCTT   [99]
Micromonas_pus    ????????????????????????????????????????AT-GTTTCTT   [99]
Mantoniel_squa    ??????????????????????????????????????????????????   [100]
Nephroselm_pyr    ??????????????????????????????????????????????????   [100]
Pedinomonas_mi    ?????????????????????????????????????GAAATA-TTTCTT   [99]
Tetraselm_cart    ????????????????????????????????????????ATAGTTTATT   [100]
Enteromorpha      ????????????????????????????ATTAAATCAGTTAGAGTTTATT   [100]
Ulva_fasci        ????????????????????????????????????????AGAGTTTATT   [100]
Ulothrix_zo       ??????????????????????????????????????????????????   [100]
Cympolia_barba    ??????????????????????????????????????????????????   [100]
Batophora_oers    ??????????????????????????????????????????????????   [100]
Codium_decort     ??????????????????????????????????????????????????   [100]
Cladophoro        ??????????????????????????????????????????????????   [100]
Blastophysa_rh    ??????????????????????????????????????????????????   [100]
Trentepohlia      ???????CTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTC-ATT   [99]
Cephaleuro_par    TTTA-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTT-ATT   [93]
Characium_vac     TT-A-TACGGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Dunaliella_par    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Chlamyd_reinha    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Volvox_carteri    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Chlorococc_min    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Draparn_plum      ??????????????????????????????????????????????????   [100]
Uronema_belk      ???????????????????????????????????????????GTTTATT   [100]
Chlamydom_moew    ????????????????????????????ATTAAATCAGTTATAATTTATT   [100]
Stephanos_pl      ?????????????????GCGAATGGCTCATTAAATCAGTTATAGTTTATT   [100]
Carteria_rad      ?????????????????GCGAATGGCTCATTAAATCAGTTATAGTTTATT   [100]
Gonium_pecto      ????????????????????????GCTCATTAAATCAG-TATAGTTTATT   [99]
Chlorella_kess    TTTA-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [99]
Chlorella_vulg    TTTA-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [99]
Protothec_wic     TT-A-TACTATGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [96]
Chlorella_prot    TTTACTACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [99]
Chlorella_min     TTTA-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [99]
Neochloris_aqu    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Neochloris_vig    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Pediastrum_dup    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Scenedesm_obl     TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Characium_hin     TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Chlorella_fus     TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Ankistrodesmus    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Pseudotreb_gig    ????????????????????????????????????????????????TT   [100]
Pleurastr_terr    ??????????????????????????????????TCAGTTATAGTTTATT   [100]
Characium_per     TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Parietochl_pse    TT-A-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [98]
Friedmannia_is    TTTA-TACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTATT   [99]

[                          110       120       130       140       150]
[                          .         .         .         .         .]

Glycine_max       TGATGGTATC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [144]
Oryza_sativa      TGATGGTACG-TGCTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [144]
Zamia_pumila      TGATGGTACTCTGCTACAC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [145]
Psilotum_n        TGATGGTACCTTGCTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [146]
Equisetum_ar      TGATGGTACCTTGCTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [146]
Atrichum_angus    T-ATGGTACCTTGCTACTC---GGATAACCGTAGTA--TTCTA-AGCTAA   [143]
Notothylas_bre    ????????CCTT-CTACTC---GGATAAC-G-AGTAA-TTCTA-AGCTAA   [142]
Phaeoceros_lae    ?GATGGTACCTTGCTACTC---GGATAACC--AGTAA-TTCTA-AGCTAA   [143]
Porella_pi        TGATGGTACCTTGCTACTC---GGATAACC-TAGTAA-TTCTAGAGCTAA   [145]
Conocephal_con    ??????????????????????????????????????????????????   [150]
Asterella_tene    TGATGGTGCCTT-CTACTC---GGATAACCG-AGTAA-TTCTAGAGCTAA   [142]
Riccia            ?????????TTTACTACTC---GGATAACC-TAGTAA-TTCTAG-GCTAA   [144]
Klebsormid_fla    ????????CCTTA-TACTC---GGATAACCGTAGTAAGTTCTA-AGCTAA   [145]
Coleochaet_nit    TGATGGTAGCC---TACTC---GGATAACC-T-GTAA-TTCTAGAGCTAT   [140]
Fissidens_taxi    T-ATGGTACCTTGCTACTC---GGATAACCGTAGTAA-TTCTA-AGCTAA   [144]
Plagiomnium_cu    TGATGGTACCTTGCTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [145]
Micromonas_pus    TGGTGGTGTTTTACTACAT---GGATAACCGTAGTAA-TTCT-G-GCTAA   [143]
Mantoniel_squa    ???????????????????????????????????AA-TACATGCG-T--   [146]
Nephroselm_pyr    ????????CCTT-CT-CTC---GGAT?ACCGTAGTA---TCT-G-GCTAA   [140]
Pedinomonas_mi    TGATGGTGAAAATCTACAC---GGATACCCGT-GTA--TTCT-GAGCTAA   [142]
Tetraselm_cart    TGATGGTACC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [145]
Enteromorpha      TGATGGTACCACACTACTC---GGATAACCGTAGTAA-AGCTACAGCTAA   [146]
Ulva_fasci        TGATGGTACCACACTACTC----GATAACCGTAGTAA-AGCTAC-GCTAA   [144]
Ulothrix_zo       ???????????????????????GATAACCGTAGTAA-TTCTAGA-CTAA   [148]
Cympolia_barba    ??????????????????????????????????????????????????   [150]
Batophora_oers    ??????????????????????????????????????????????????   [150]
Codium_decort     ??????????????????????????????????????????????????   [150]
Cladophoro        ??????????????????????????????????????????????????   [150]
Blastophysa_rh    ??????TAC-TTGCTACTT---GGATAACC--AGTAA-TTCAGAAGCTAA   [143]
Trentepohlia      T-ATGGTGT-TT-CTACTC---GGATAACC--AGGAA-AACTAGAGCTAA   [140]
Cephaleuro_par    TGATGGTG-TTTGTTACTC---GGATAACCGTAGGA----CTAGAGCTAA   [135]
Characium_vac     TGATGGTACC-TCTTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Dunaliella_par    TGATGGTACCTT--TACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [142]
Chlamyd_reinha    TGATGGTACC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Volvox_carteri    TGATGGTACC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Chlorococc_min    TGATGGTACC-TATTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Draparn_plum      ????????????CTTACTC---GGATAACTGTAGTAA-TTCTA-AGCTAA   [145]
Uronema_belk      TGATGATACCTT--TCCTC----GATAACCGT-GTA--TTCTAGAGCTAA   [141]
Chlamydom_moew    TGATGGTAC-TTACTACTT---GGATAACCGTAGTAA-TTCTAGAGCTAA   [145]
Stephanos_pl      TGATGGTACCTT--TACTC---GGATAACCGTAGTAA-TTCTAG-GCTAA   [143]
Carteria_rad      TGATGGTAC-TTGGTACTC---GGATAACTGTACCAA-AG-TAGAGCTAA   [144]
Gonium_pecto      TGATGGTACC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [144]
Chlorella_kess    TGATGGTACCTTACTAC-C---GGATAACCGTAGTAA-TTCTAGAGCTAA   [144]
Chlorella_vulg    TGATGGTAC-TTACTACTC---GGATACCCGTAGTAA-ATCTAGAGCTAA   [144]
Protothec_wic     TGATGGTACC-TACTACTC---GGATACCCGTAGTAA-TTCTAGAGCTAA   [141]
Chlorella_prot    TGATGGTACC-TGCTACTG---GGATACCCGTAGTAA-TTCTAGAGCTAA   [144]
Chlorella_min     TGATGGTACC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [144]
Neochloris_aqu    TGATGGTACC-TCCTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Neochloris_vig    TGATGGTACC-TCCTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Pediastrum_dup    TGATGGTACCTT-CTACTC---GGATACCCGTAGTAA-TTCTAGAGCTAA   [143]
Scenedesm_obl     TGGTGGTACCTTACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [144]
Characium_hin     TGATGGTACCTT-CTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Chlorella_fus     TGGTGGTACCTTACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [144]
Ankistrodesmus    TGATGGTACC--TCTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [142]
Pseudotreb_gig    TGATGGTGCCTTACT-CTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [145]
Pleurastr_terr    TGATGGTACACTACTACTC---GGATAACCGTAGTAA-TTCTAGGGCTAA   [146]
Characium_per     TGATGGTACC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Parietochl_pse    TGATGGTACC-TACTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]
Friedmannia_is    TGATGGTACC--CTTACTC---GGATAACCGTAGTAA-TTCTAGAGCTAA   [143]

[                          160       170       180       190       200]
[                          .         .         .         .         .]

Glycine_max       TACGTGCAACAAACCCCGACTTC--TGGAAGGGATGCATTTATTAGATAA   [192]
Oryza_sativa      TACGTGCAACAAACCCCGACTTCC-GGG-AGGGGCGCATTTATTAGATAA   [192]
Zamia_pumila      TACGTGCACCAAATCCCGACTTTT-TG-AAGGGACGCATCTATTAGATAA   [193]
Psilotum_n        TACGTGCACCAACTCCCGACTTC--CGG-AGGGACGCATTTATTAGATAA   [193]
Equisetum_ar      TACGTGCACCAACTCCCGACTTC--TGG--GGGA-GCATTTATTAGATAA   [191]
Atrichum_angus    TACGTGCACAAACTCCCGACCTC--TGGAAGGG-CG-TTTTATTAGATAA   [189]
Notothylas_bre    -ACGTGCAACAACTCCCGACTC---TGGAAGG-AG--ATTTATTAGATAA   [185]
Phaeoceros_lae    T-CGTGCAACAACTCCCGGCTTT--TGG-AGGG-TGT-TTT-TTAG-TAA   [185]
Porella_pi        TACGTGCACCAACTCCCGACTTC--TGGAAGGG-CGTATTTATTAGATAA   [192]
Conocephal_con    ?ACGTGCACC-AGGCTCGAC----?TGGAAGGGG----TTTTTTAGATAA   [191]
Asterella_tene    TACGTGCACCAACGCCCGACTTT-CCGGAAGGG--TGTTTTATTAGATAA   [189]
Riccia            TACGTGCACCAACGCCCGACTTCG-CGGAAGGGCTGTATTTATTGGATAA   [193]
Klebsormid_fla    TACGTGCACCAAATCCCGACTTC--TGGAAG?ACGTGATTTATTAGATAA   [193]
Coleochaet_nit    ACCGTGC-CC--ATCC-GACTTC--TGGAAGG--GGTATTTGTTAGATAA   [182]
Fissidens_taxi    TACGTGCACAAACTCC-GACTCG-?TGGA-GGGACG-ATTTATTAGATAA   [190]
Plagiomnium_cu    TACGTGCACAAAATCCCGACTGG---G?AAGGGA??GATTTATTGGATAA   [192]
Micromonas_pus    TACATGC-GTAAATCCCGACTTC---GGAAGGGACGTATTTATTAGAT-A   [188]
Mantoniel_squa    -----------AATCCCGAC-TC---GG--GGG--GT-TTTATTAGAT--   [174]
Nephroselm_pyr    TACGTGC-GCAACACCCGACTTC---GGAAGGGTTGT-TATATTAGATAA   [185]
Pedinomonas_mi    TACGT-C-GTAA---CTCCATT----GG-AGG-T----TTT-TT-G-TCC   [174]
Tetraselm_cart    TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATTT   [192]
Enteromorpha      TACGTGC-GTAACTCCCGACYC---CG-AAGGGACGT-TTTATTAGATTC   [190]
Ulva_fasci        TACGTGC-GTAACTCCCGACTTA--CG-AAGGGACG-ATTTATTAGATTC   [189]
Ulothrix_zo       TACGTGT-GTAAATCCCGACT?A--CG-AAGGGACGTATTTATTA?ATCC   [194]
Cympolia_barba    ??????????????????????????????????????????????????   [200]
Batophora_oers    ??????????????????????????????????????????????????   [200]
Codium_decort     ??????????????????????????????????????????????????   [200]
Cladophoro        ??????????????????????????????????????????????????   [200]
Blastophysa_rh    TACAT-C-GCGGATCCCAGACTTC-TGGAAGGGACGTATTTATTAGATAA   [190]
Trentepohlia      TACGTGC-GTAAATCCCGACCTCC---GAAGGGACGTATTTATTAGATAA   [186]
Cephaleuro_par    TACGTGC-GTAAATCCCGA--TC---GGAAGGGA-G-ATTTATTAGATAA   [177]
Characium_vac     TACGTGC-GTAAATCCCGACTTA--TGGAAGGGACGTATTTATTAGATAA   [190]
Dunaliella_par    TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATAA   [189]
Chlamyd_reinha    TACGTGC-GCACAACCCGACTTC--TGGAAGGGTCGTATTTATTAGATAA   [190]
Volvox_carteri    TACGTGC-GCACAACCCGACTTC--TGGAAGGGTCGTATTTATTAGATAA   [190]
Chlorococc_min    TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATAA   [190]
Draparn_plum      TACGTGCTTCAAGTCCCAACTTC--TGGAAGGG---TGGTTATAAGA-GT   [189]
Uronema_belk      TACGTGC-GCAACTCCCGACTTC--TGG--GGGA-GTGTT-ATTAGATCT   [184]
Chlamydom_moew    TACATGCGGATAATCCCAACTTC--TGGAAGGGACGTATTTATTAGATAA   [193]
Stephanos_pl      TACGTGC-GTAAATCCCGACTTC--TGGAAGGGA-GTATTTATTAGATAA   [189]
Carteria_rad      TACGTGC-GTAAATCCCGACTCA--C-GAAGGGACGTATTTATTAGATAA   [190]
Gonium_pecto      TACGTGC-GCACAACCCGACTTC--TGGAAGGGTCGTATTTATTAGATAA   [191]
Chlorella_kess    TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATTT   [191]
Chlorella_vulg    TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATAA   [191]
Protothec_wic     TACGTGC-GCACATCCCGACTTC--TGGAAGGGACGTATTTATTAGATCC   [188]
Chlorella_prot    TACCTGC-GCAAACCCCGACTTTGGTGGAAGGGGTGTATTTATTAGATCC   [193]
Chlorella_min     TACGTGC-GCAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATAT   [191]
Neochloris_aqu    TACGTGC-GTAAAACCCGACTTC--TGGAAGGGTCGTATATATTAGATAA   [190]
Neochloris_vig    TACGTGC-GTAAAACCCGACTTC--TGGAAGGGTCGTATATATTAGATAA   [190]
Pediastrum_dup    TACGTGC-GTAAAACCCGACTTC--TGGAAGGGTCGTATATATTAGATAA   [190]
Scenedesm_obl     TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATATATTAGATAA   [191]
Characium_hin     TACGTGC-GTAAAACCCGACTTC--TGGAAGGGTCGTATATATTAGATAA   [190]
Chlorella_fus     TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATATATTAGATAA   [191]
Ankistrodesmus    TACGTGC-GCAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATAA   [189]
Pseudotreb_gig    TACGTGC-GCACATCCCGACTCC----GAAGGGA-G--TTTATTAGATAA   [187]
Pleurastr_terr    TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATAA   [193]
Characium_per     TACGTGC-GTAAATCCCGACTTC--TGGAAGGGACGTATTTATTAGATAA   [190]
Parietochl_pse    TACGTGC-GCACATCCCGACTTC--TGGAAGGGACGTATTTATTAGATTA   [190]
Friedmannia_is    TACGTGC-GTAAACCCCGACTTC--TGGAAGGGGCGTATTTATTAGATAA   [190]

[                          210       220       230       240       250]
[                          .         .         .         .         .]

Glycine_max       AAGGTCAACACAGGC-TCTGCCTGTGCT-TTGATGATTCATGATAACTCG   [240]
Oryza_sativa      AAGGCTGACGCGGGC-TCCGCCCGCGAT-CCGATGATTCATGATAACTCG   [240]
Zamia_pumila      AAGGCCGATGCGGGC-TTTGCCCGGCGT-TTGGTGAATCATGATACCTTG   [241]
Psilotum_n        AAGGCCGATGCGGGC-TT-GCCCGGTTATGC-GT-ATTCATGATAACTCT   [239]
Equisetum_ar      AAGGCCGATGCGGGC-TGTGCCCGGTAA----CGGATTC--GATAACTTC   [234]
Atrichum_angus    AAGGCCGATGC-GGC-TT-GCCCGGTAT-TCGGTGACTCA-GATAACTCG   [234]
Notothylas_bre    AAG---GATG---GC-TT-GTCCCGTTT-A--CTGAATC-TGATAACTCC   [223]
Phaeoceros_lae    AAG---GA-GCGG-C-TT-GTCCCGGTTTACGGTGAA-CW-GATAACTCC   [226]
Porella_pi        AAGACCGATGCGGGC--T-GCCCGGTGTTGCGGTGAATCATGATAACTCG   [239]
Conocephal_con    AAGACCGATGGGGGTGCT-GCC-GGTGATTC-GGGA-TC-TGATAACTCG   [236]
Asterella_tene    AAGACCGATG---GC-TT-GCC-CGGTGATT-CGGAATCATGATAACTCG   [232]
Riccia            AAGGCCGATG-GGGC-TTGCCCCGGTGTTT-CGTGAATCATGATAACTCG   [240]
Klebsormid_fla    AAGGCCAATGCGGGC-TT--CCCGGTATTGCGGTGAATCATGATAACTCG   [240]
Coleochaet_nit    AAGACCAAT----GC-TC-GCCCGGTGTT-CGGTGAATC--GATAACTCC   [223]
Fissidens_taxi    AAGGC-GA-T-C-------GCC-GGTGTT---GCGAATCA-GATAAC?AG   [225]
Plagiomnium_cu    AAGGCCGA-TGCGGGCT-TGCCCGGTTC-GCGG-GAC----GATAAC--G   [232]
Micromonas_pus    AAGAC--AC----------CTC--GTCT-GCGGTGAATCATGATAACTTC   [223]
Mantoniel_squa    AAGACC-AC----------CTCG-TTCT-GCGGTGAATCA-GAT-ACTT-   [208]
Nephroselm_pyr    AAGACCGAC----CT-TCG-GCG-TTCT-TCGGTGAATCATGATATTTCC   [227]
Pedinomonas_mi    -AACC-AGC-----C-TT-GGGG--TTT-TCTGTGAATC-TGATACTTTC   [211]
Tetraselm_cart    AAG-CGG-C---AGC-TTT-C---GTC---CGGTGAA-CA-GATAACTTC   [227]
Enteromorpha      -AGACCGAC-CGTGC-TTGCCGTCTTT----GGTGAATCATGGTAACTTC   [233]
Ulva_fasci        AAGGCCGAC-TGC---TTGACGTCTTT----GGTGAATCATGGTAACTTC   [231]
Ulothrix_zo       AAGAC?GAC-CGC---TTG-CACCTTT----GGTGAATCATA-TAACTTC   [234]
Cympolia_barba    ??????????????????????????????????????????????????   [250]
Batophora_oers    ??????????????????????????????????????????????????   [250]
Codium_decort     ??????????????????????????????????????????????????   [250]
Cladophoro        ??????????????????????????????????????????????????   [250]
Blastophysa_rh    AAGGCYGAC-CGGGC-TT---CCCGAGTGCAGGTGACT-ATGATAGACAT   [234]
Trentepohlia      GAGGCCGGAACGCGC-TTAGGCCCGCT--TCGGTGAATCATAATA-ACTT   [232]
Cephaleuro_par    GAGGC-GAC-CGGGC-TT-GTCCCGCT--TCGGTGA-TC-TGATAACTCA   [219]
Characium_vac     AAGGCCAGC-CGGGC-T-TGCCCGACCC-TAGGCGAATCATGATAACTTC   [236]
Dunaliella_par    AAGGCCAGC-CGGGC-T-TGCCCGACTC-TTGGCGAATCATGATAACTTC   [235]
Chlamyd_reinha    AAGGCCAGC-CGGGC-TCTGCCCGACCT-GCGGTGAATCATGATAACTTC   [237]
Volvox_carteri    AAGGCCAGC-CGGGC-TTTGCCCGTTGA-ATGGTGAATCATGATAACTTC   [237]
Chlorococc_min    AAGGCCAGC-CGGGC-T-TGCCCGACCT-ATGGCGAATCATGATAACTTC   [236]
Draparn_plum      AAGGCCAA--ACGCT---CTCCCGATTT---GA-GAC-----ATAAGTCC   [225]
Uronema_belk      -AGGC-A------GC----TCCCGACA----GGTGA-TCATG-TAACTCC   [216]
Chlamydom_moew    AAGGCCAGC-CGTGC-T-TGCACGATCC-TGGTTGATTCATGATAACTTC   [239]
Stephanos_pl      AAGGCCAGC-GAGGC-TTGCTCGACTCTT-GG-CGAATCATGATAACTTG   [235]
Carteria_rad      AAGGCCAGC-CGGGC-T-TGCCCGACTTTT-GGCGACTCATGATAACTTC   [236]
Gonium_pecto      AAGGCCAGC----GC-TTTGCCCGACT--GCGGTGAATCATGATAACTTC   [234]
Chlorella_kess    AAGGCCGAC-CCGGC-TCTGCCGGTCTC-GCGGTGAATCATGATAACTTC   [238]
Chlorella_vulg    AAGGCCGAC-CGGGCTTCTGCCCGACTC-GCGGTGAATCATGATAACTTC   [239]
Protothec_wic     AAGGCCGAC-CGGGC-T-TGCCCGACTC-GCGGTGAATCATGATAACTTT   [234]
Chlorella_prot    AAGGCCGAC-CGGGC-TC-GCCCGACTC-GCGGTGACTCATGATAACTTT   [239]
Chlorella_min     AAGGCCGAC-CGGGC-TCTGCCCGACTC-GCGGTGAATCATGATAACTTC   [238]
Neochloris_aqu    AAGACC-AG-CCGGAC-TTTGTCCGACCCGCGGTGACTCATGATATCTTC   [237]
Neochloris_vig    AAGACC-AG-CCGGAC-TTTG????GCCCGCGGTGACTCATGATATCTTC   [237]
Pediastrum_dup    AAGGCCGAGCCG??C-TTTGTCCGACCC-GCGGTGAATCATGATATCTTC   [238]
Scenedesm_obl     AAGGCCGAC-CGAGC-TTTGCTCGACCC-GCGGTGAATCATGATATCTTC   [238]
Characium_hin     AAGGCCGAC-CGGGC-TTGCCCGACCC--GCGGTGAATCATGATATCTTC   [236]
Chlorella_fus     AAGGCCGAC-CGGGC-TT?GCCCGACCC-GCGGTGAATCATGATATCTTC   [238]
Ankistrodesmus    AAGGCCGAC-CGGGC-TCTGCCCGACCC-GCGGTGAATCATGATAACTTC   [236]
Pseudotreb_gig    AAGGC-GAG-CCGGG-GC--CCCGAGAC-GCGGTGAATCA-GATAAC--C   [228]
Pleurastr_terr    AAGGCCGAC-CGGACTC-G-TCCGACCC-GCGGTGAA-CCTGATAACTTC   [238]
Characium_per     AAGGCCGAC-CGGGC-T-TGCCCGACTC-GCGGTGAATCATGATAACTTC   [236]
Parietochl_pse    AAGGCCGAC-CGGGC-TCTGCCCGACTC-GCGGTGACTCATGATAACTTC   [237]
Friedmannia_is    AAGGCCGAC-CGGGC-TTTGCCCGACTC-GCGGTGAATCATGATAACTTC   [237]

[                          260       270       280       290       300]
[                          .         .         .         .         .]

Glycine_max       TCGGATCGCACGGCCTTTGTGCCGGCGACGCATCATTCAAATTTCTGCCC   [290]
Oryza_sativa      ACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCC   [290]
Zamia_pumila      ATGGATTGCATGGCCCTCGAGCCGGCGACGCTTCATTCAAATTTCTGCCC   [291]
Psilotum_n        GCGAATCGCACGGCC???????????????????????????????????   [289]
Equisetum_ar      CCGGATCGCACGGCCT????ACGGGTGA??????????????????????   [284]
Atrichum_angus    TCGAATCGCACGGCCTTA????????????????????????????????   [284]
Notothylas_bre    TCGAATCGCACGGCCCT?????????????????????????????????   [273]
Phaeoceros_lae    TCGGATCGCACGGCCCT?????????????????????????????????   [276]
Porella_pi        TCGAATCGCACGGCC???????????????????????????????????   [289]
Conocephal_con    ACGAATCGCACGGCC???????????????????????????????????   [286]
Asterella_tene    ACGAATCGCACGGCCT??????????????????????????????????   [282]
Riccia            ACGAATCGCACGGCCCCC????????????????????????????????   [290]
Klebsormid_fla    TCGAATCGCACGGCCTTTGCGCTG??????????????????????????   [290]
Coleochaet_nit    TCG?ATCGCACGGCCT??????????????????????????????????   [273]
Fissidens_taxi    TCGAATCGACCC??????????????????????????????????????   [275]
Plagiomnium_cu    TCGAATCGCA-GGCCG??????????????????????????????????   [281]
Micromonas_pus    -CGGATCGCATGGCTTCAA???????????????????????????????   [272]
Mantoniel_squa    -CGGATC-CATGGCTTCAA?GCCG?CGATGTTCCATTCAAATTTCTGCCC   [256]
Nephroselm_pyr    ACGGATCGCAT--CTTCCC???????????????????????????????   [275]
Pedinomonas_mi    ??????????????????????????????????????????????????   [261]
Tetraselm_cart    ACGAATCGCATGGCCTCCGCGCCGGCGATGTTTCATTCAAATTTCTGCCC   [277]
Enteromorpha      ACGAATCGCA-GG--TTTACCCCGG?????????????????????????   [280]
Ulva_fasci        ACGAATCGCAGGG--TTTATC?????????????????????????????   [279]
Ulothrix_zo       ACGAATCGCATGG-CCTTGTGC-GGC????????????????????????   [282]
Cympolia_barba    ??????????????????????????????????????????????????   [300]
Batophora_oers    ??????????????????????????????????????????????????   [300]
Codium_decort     ??????????????????????????????????????????????????   [300]
Cladophoro        ??????????????????????????????????????????????????   [300]
Blastophysa_rh    CACACGAATC????????????????????????????????????????   [284]
Trentepohlia      CAC--GAATCG---CTG-GTC---GAACYGA???????????????????   [273]
Cephaleuro_par    ACGA-TCG------CTG-GTCCGTGAACCGC???????????????????   [261]
Characium_vac     ACGAATCGCATGCCCTC-GTGGCGGCGATGTTTCATTCAAATTTCTGCCC   [285]
Dunaliella_par    ACGAATCGCACGGC-TTCGTGCCGGCGATGTTTCATTCAAATTTCTGCCC   [284]
Chlamyd_reinha    ACGAATCGTATGGGCTC-GTCCCGACGATGTTTCATTCAAATTTCTGCCC   [286]
Volvox_carteri    ACGAATCGTATGGCCAC-GTGCCGACGATGTTTCATTCAAATTTCTGCCC   [286]
Chlorococc_min    ACGGACCGCATGGCCTT-GTCGCGGCGGCGTTTCATTCAAATTTCTGCCC   [285]
Draparn_plum      ACG-ATCGCA--GCCT--GGTGACGGGTGA????????????????????   [270]
Uronema_belk      ACGAATCGC--GGCC---GCGC????????????????????????????   [261]
Chlamydom_moew    ACGAATCGCATGGCCTT-GTGCCGGC????????????????????????   [288]
Stephanos_pl      ACGAATCGCATGGCCTG-GTAACGGGTGA?????????????????????   [284]
Carteria_rad      ACGAATCGCATGGCCTG-GTAACGGGTGA?????????????????????   [285]
Gonium_pecto      ACGAATCGTATGGCCTG-GTAACGGGTGA?????????????????????   [283]
Chlorella_kess    ACGAATCGCATGGCCTT-GCGCCGGCGATGTTTCATTCAAATTTCTGCCC   [287]
Chlorella_vulg    ACGAATCGCATGGCCTT-GTGCCGGCGATGTTTCATTCAAATTTCTGCCC   [288]
Protothec_wic     ACGAATCGCATGGCCTTTGTGCCGGCGATGTTTCATTCAAATTTCTGCCC   [284]
Chlorella_prot    ACGAATCGCATGGTCTCTGCACCGGCGATGTTTCATTCAAATTTCTGCCC   [289]
Chlorella_min     ACGAATCGCATGGCCTC-GTGCCGGCGATGTTTCATTCAAATTTCTGCCC   [287]
Neochloris_aqu    ACGAATCGCATGGCCTT-GTGCACGGCATGTTTCATTCAAATTTCTGCCC   [286]
Neochloris_vig    ACGAATCGCATGGCCTT-GTG????CGATGTTTCATTCAAATTTCTGCCC   [286]
Pediastrum_dup    ACGAATCGCATGGCCTT-GCGCCGGCGATGTTTCATTCAAATTTCTGCCC   [287]
Scenedesm_obl     ACGAAGCGCATGGCCTT-GTGCCGGCGCTGTTCCATTCAAATTTCTGCCC   [287]
Characium_hin     ACGAATCGCATAGCCTT-GTGCTAGCGA-GTTTCATTCAAATTTCTGCCC   [284]
Chlorella_fus     ACGAAGCGCATGGCCTT-GCGCCGGCGCTGTTCCATTCAAATTTCTGCCC   [287]
Ankistrodesmus    ACGAATCGCATAGCCTC-GTGCTGGCGATGTTTCATTCAAATTTCTGCCC   [285]
Pseudotreb_gig    ACGAATCG--TAGCCTT-GTGCCGC?????????????????????????   [275]
Pleurastr_terr    ACGAATCGCATGGCCTT-GC-CC???????????????????????????   [286]
Characium_per     ACGAATCGCACAGCCTT-GTGCTGGCGATGTTTCATTCAAATTTCTGCCC   [285]
Parietochl_pse    ACGAATCGCAT-GCCTTCGTGCCGGCGATGTTTCATTCAAATTTCTGCCC   [286]
Friedmannia_is    ACGAATCGCATGGCCTT-GTGCCGGCGATGTTTCATTCAAATTTCTGCCC   [286]

[                          310       320       330       340       350]
[                          .         .         .         .         .]

Glycine_max       TATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGA   [340]
Oryza_sativa      TATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGA   [340]
Zamia_pumila      TATCAACTTTCGATGGCAGGATAGAGGCCTACCATGGTGGTGACGGGTGA   [341]
Psilotum_n        ?????????????????????????????????????TGGTGACGGGTGA   [339]
Equisetum_ar      ??????????????????????????????????????????????????   [334]
Atrichum_angus    ??????????????????????????????????????????????????   [334]
Notothylas_bre    ??????????????????????????????????????????????????   [323]
Phaeoceros_lae    ?????????????????????????????????????????????????A   [326]
Porella_pi        ??????????????????????????????????????????????????   [339]
Conocephal_con    ??????????????????????????????????????????????????   [336]
Asterella_tene    ??????????????????????????????????????????????????   [332]
Riccia            ??????????????????????????????????????????????????   [340]
Klebsormid_fla    ????????????????????????????????????????TAACGGGTGA   [340]
Coleochaet_nit    ??????????????????????????????????????????????????   [323]
Fissidens_taxi    ????????????????????????????????????????TGACGGGTGA   [325]
Plagiomnium_cu    ??????????????????????????????????????????????????   [331]
Micromonas_pus    ??????????????????????????????????????????????????   [322]
Mantoniel_squa    TATCAACTTTCGACGGTAGGATAGAGGCCTACCGTGGTGTTCACGGGTGA   [306]
Nephroselm_pyr    ??????????????????????????????????????????????????   [325]
Pedinomonas_mi    ????????????????????????????????????????????CGGTGA   [311]
Tetraselm_cart    TATCAATTTGCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [327]
Enteromorpha      ??????????????????????????????????????????????????   [330]
Ulva_fasci        ??????????????????????????????????????????????????   [329]
Ulothrix_zo       ??????????????????????????????????????????????????   [332]
Cympolia_barba    ??????????????????????????????????????????????????   [350]
Batophora_oers    ??????????????????????????????????????????????????   [350]
Codium_decort     ??????????????????????????????????????????????????   [350]
Cladophoro        ???????????????????????TTGGACTAC-A-CCT-T--ACG-GTAG   [344]
Blastophysa_rh    ?????????????????????????GGCCTACCACGGTATCGACGGGTGA   [334]
Trentepohlia      ??????????????????????????????????????????????????   [323]
Cephaleuro_par    ??????????????????????????????????????????????????   [311]
Characium_vac     TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [335]
Dunaliella_par    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [334]
Chlamyd_reinha    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [336]
Volvox_carteri    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [336]
Chlorococc_min    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [335]
Draparn_plum      ??????????????????????????????????????????????????   [320]
Uronema_belk      ??????????????????????????????????????????????????   [311]
Chlamydom_moew    ??????????????????????????????????????????ACGGCTGA   [338]
Stephanos_pl      ??????????????????????????????????????????????????   [334]
Carteria_rad      ??????????????????????????????????????????????????   [335]
Gonium_pecto      ??????????????????????????????????????????????????   [333]
Chlorella_kess    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [337]
Chlorella_vulg    TATCAACTTTTGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [338]
Protothec_wic     TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [334]
Chlorella_prot    TATCAACTTT-GTCGGTAGGATAGAGGCCTACCGAGGTGTTCACGGGTGA   [338]
Chlorella_min     TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [337]
Neochloris_aqu    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [336]
Neochloris_vig    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [336]
Pediastrum_dup    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [337]
Scenedesm_obl     TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [337]
Characium_hin     TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [334]
Chlorella_fus     TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [337]
Ankistrodesmus    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [335]
Pseudotreb_gig    ??????????????????????????????????????????????????   [325]
Pleurastr_terr    ??????????????????????????????????????????????????   [336]
Characium_per     TATCAACTTTCGATGGTAACGTAGTGGGTTACCATGGTGGTAACGGGTGA   [335]
Parietochl_pse    TATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTAACGGGTGA   [336]
Friedmannia_is    TATCAACTTTCGATGGTTGGATAGAGGCCAACCATGGTGGTAACGGGTGA   [336]

[                          360       370       380       390       400]
[                          .         .         .         .         .]

Glycine_max       CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [390]
Oryza_sativa      CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [390]
Zamia_pumila      CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCCGAGAAACGGCTACCA   [391]
Psilotum_n        CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [389]
Equisetum_ar      CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [384]
Atrichum_angus    ???AGAATT----TTCGATTCCGGA-AGGGAGCCTGAGAA-CGGCTACCA   [378]
Notothylas_bre    ????????????GTTCGATTCCGGAGAGGGA--C-GAGAAACGGCTACCA   [370]
Phaeoceros_lae    CGGA-AATTAGGGTTCGATTCCGGA-A-GGAGCCTGAGAAACGGCTACCA   [373]
Porella_pi        ??????????????????????????????????????AAACGGCTACCA   [389]
Conocephal_con    ?????????????????????????????GAGCCTGAGAAACAGCTACCA   [386]
Asterella_tene    ??????????????????????????AGGGAGCCTGAG?AACGGCTACCA   [382]
Riccia            ??????????????????????????????????????????????????   [390]
Klebsormid_fla    CGGAGAATT?GGGTTCGATTCCGGAGA?GGAGCCTGAGAAACGGCTACCA   [390]
Coleochaet_nit    ??????????????????????GGAGAGGGAGCCTGAGAAACGGCTACCA   [373]
Fissidens_taxi    CGGA?AATTAGGGTTCGATTCCG-A-A-GGAGCCTGAG---CGGCTACCA   [369]
Plagiomnium_cu    ???????????????????????GA-A-GGAGCCT-AG---CGGCTACCA   [375]
Micromonas_pus    ??????????????????????????????????????????????????   [372]
Mantoniel_squa    CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [356]
Nephroselm_pyr    ?????????????????????????????????????????CGGCTACCA   [375]
Pedinomonas_mi    CG??GAATT?GGGTTCGTTCCGG--GAGGGAGCCTGAGAAACGGCTACC-   [358]
Tetraselm_cart    CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [377]
Enteromorpha      ??????ATTAGG?TTCGATTCCGGA?AGGGAGCCT?AGG--CGGCTACCA   [378]
Ulva_fasci        ????GGATTAGGGTTCGATTCCGGAGA--GAGCCTGAG---CGGCTACCA   [374]
Ulothrix_zo       ?GGAGTATTAGT?TTCTTTTCCGGAGA--CA-CCTGAG---C-GCTACCA   [375]
Cympolia_barba    ???????TATGGGTTTGATTCCGGAGAGGGAGCTTGAGA-CTGGCTACCA   [399]
Batophora_oers    ?GGAGGTTGAGGGTTTGATTCCGGATT-GGA-CCTGAGA--CGGC--CC-   [393]
Codium_decort     ??????ATC-GGGTTTGGTTCCGGAGA--GAGCCTGAGGC-CGGCTACCA   [396]
Cladophoro        CGGAGGATTAGGGTTCGGATTCCGGAGGGGAGCCTG-GA--CGGCTACCA   [391]
Blastophysa_rh    CGGAGGATTAGGGTTCGATTCCGGAGGGGGAGCCTGAGA-ACGGCTACCA   [383]
Trentepohlia      ??????????????????????????????????????????????????   [373]
Cephaleuro_par    ???????????????????????????GGGAGCCTGAGAAACGGCTACCA   [361]
Characium_vac     CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [385]
Dunaliella_par    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [384]
Chlamyd_reinha    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAGATGGCTACCA   [386]
Volvox_carteri    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAGATGGCTACCA   [386]
Chlorococc_min    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [385]
Draparn_plum      CGGAGGATTAGGGTTCGGTTCCGGA-AGGGAGCCTGAGAAATGGCTACCA   [369]
Uronema_belk      ?????????????TTCGATTCCGGAGA--GAGCCTGAGGAACGGCTACCA   [359]
Chlamydom_moew    C----AATCAGGGTTCGATTCCGG-GAGGGAGCCT-AG---CGGCT-CCA   [378]
Stephanos_pl      CGG-GGATTAGGGTTCGATTCCGG-GAGGGAGCCTGAGAAACGGCTACCA   [382]
Carteria_rad      CGGAGGATTAGGGTTCGATTCCGGAGA-GGAGCCTGAGAGATGGCTACCA   [384]
Gonium_pecto      CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAGATGGCTACCA   [383]
Chlorella_kess    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [387]
Chlorella_vulg    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [388]
Protothec_wic     CGGAGGATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [384]
Chlorella_prot    CGGAGGATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [388]
Chlorella_min     CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [387]
Neochloris_aqu    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [386]
Neochloris_vig    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [386]
Pediastrum_dup    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [387]
Scenedesm_obl     CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [387]
Characium_hin     CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [384]
Chlorella_fus     CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [387]
Ankistrodesmus    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [385]
Pseudotreb_gig    ????GGATTAGGGTTCG?TTCCGGAGAGGGAGCCTGAG---CGGCT-CCA   [371]
Pleurastr_terr    ??????ATTAGGGTTCGATTCCGG-GAGGGAGCCTGAG---CGGCTACCA   [382]
Characium_per     CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [385]
Parietochl_pse    CGGAGGATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA   [386]
Friedmannia_is    CGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAGACGGCTACCA   [386]

[                          410       420       430       440       450]
[                          .         .         .         .         .]

Glycine_max       -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACGGG   [438]
Oryza_sativa      -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACGGG   [438]
Zamia_pumila      -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACGGG   [439]
Psilotum_n        -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCC-GAC-CGGG   [435]
Equisetum_ar      -CATCCAAGGAAGGCAGCGGGCGCGCAAATTACCC-AATCC-GACACGGG   [431]
Atrichum_angus    -CATCCA---AAGGCAG-?-??-?-?--ATT-CCC-AATCC-GAC--GGG   [413]
Notothylas_bre    -CATCC--?--AGGCAG---????----ATTACCC-AATCC-GA---GGG   [403]
Phaeoceros_lae    -CATCC-AG-AAGGCA-CA--CGCGC--ATTACCC-AATCC-GAC-CGGG   [412]
Porella_pi        -CATCCAAGG-AGGCAGCCGG-GCG---ATTACCC-AATACCGACACAGG   [432]
Conocephal_con    -CATCCAAGGA-GGCAGCAGGCGCG---ATTACCC-AATCCCGACACGGG   [430]
Asterella_tene    -CATCC-AG-AAGGCAG-A---GC-C--ATTACCC-AATCC-GAC-----   [415]
Riccia            ???????????????????????CGCAAATTACCC-A-TCC-GAC-----   [432]
Klebsormid_fla    -CATCCAAGGAAGGCAGCAGGCGCGC--ATT-CCC-AATCCTG-T-CAGG   [433]
Coleochaet_nit    -CATCCAAGGA?GGCAG--GGCGCG--GATTACCC-AATCCTGATACAGG   [417]
Fissidens_taxi    -CATCC--GGAAGGCAGC--GCGCGC--ATTACCC-AATCC-GA---GGG   [407]
Plagiomnium_cu    -CATCC-AGGAAGGC--C----------ATTACCC-AACTCCGA---GGG   [407]
Micromonas_pus    ??????????????????????????????????????????????????   [422]
Mantoniel_squa    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [404]
Nephroselm_pyr    -CATCCAA--AAGGC-GC--GCGCGC--ATTA-CC-AATCCTGAC-CAGG   [414]
Pedinomonas_mi    -CATC-AAGGAAGGC-GCGGGCGCGC--ATTACCC-AATCC-GAGA--GG   [399]
Tetraselm_cart    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [425]
Enteromorpha      GCATCCGAGGAAGGCAGC-GGCGCGCAAATTACCC-AATCCTG--GCAGG   [424]
Ulva_fasci        -CATCC-A--AAGGCAGCA-GCGCGCAAATTACCC-AATCCTGA---AGG   [415]
Ulothrix_zo       --ATCC-GGAACGGCAG--GGCGC----AT--CCC-CTTCCT-----AG-   [407]
Cympolia_barba    -CATCCAAGG-AGGCAGC-GGCGCGAAAATTACCC-AATCTAGATATTGT   [445]
Batophora_oers    --YTTCC-GG--GGC-GC-GGCGC----ATY-CCC-AATC--GACATTGT   [428]
Codium_decort     --CATCC-GGAAGGC-GC--GCGCGC-AATTACCC-AATCCCC--CGGGT   [436]
Cladophoro        -CATCC-AGG-AGGCAGCAGGCGCGC--ATTACCC-AATCC-AAC--AGG   [432]
Blastophysa_rh    -CAACCAAGGTAGG-AGCAGGCGCG---ATTACCC-AATCCTGAC-CGGG   [426]
Trentepohlia      ??????????????????????????????????????????????????   [423]
Cephaleuro_par    -CATCCAAGGAA-GCAGCAGGCGCGC--ATTACCCAAATCCCAAGGT--G   [405]
Characium_vac     -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCCGACACGGG   [433]
Dunaliella_par    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCCAACACGGG   [432]
Chlamyd_reinha    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCCGACACGGG   [434]
Volvox_carteri    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCCGACACGGG   [434]
Chlorococc_min    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCCGACACGGG   [433]
Draparn_plum      -CATCCAAGGAAGGCAGC-GGCGCGC-AATTACCC-AATCCTGACA--GG   [413]
Uronema_belk      -CATCC--GGAAGGC-GC---CGCGC--ATTACCC-AATCC-GA---GGG   [395]
Chlamydom_moew    --ATCC--GGAAGGC-GC-?-CGCGT-AATTACCC-AATCC------GGG   [413]
Stephanos_pl      -CATCC-AGGAAGGCAGCAGGCGCGC--ATTACCC-AATCCGAA---GGG   [424]
Carteria_rad      -CATCCAAGGAAGGCAGCA-GCGCGC--ATTACCC-AATCCTAAC-CGGG   [428]
Gonium_pecto      -CATC--AGGAAGGC----GGCGCGC--ATTACCC-AATCCGAC---GGG   [420]
Chlorella_kess    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [435]
Chlorella_vulg    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [436]
Protothec_wic     -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [432]
Chlorella_prot    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [436]
Chlorella_min     -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [435]
Neochloris_aqu    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACGGG   [434]
Neochloris_vig    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACGGG   [434]
Pediastrum_dup    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGATACGGG   [435]
Scenedesm_obl     -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGATACGGG   [435]
Characium_hin     -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACGGG   [432]
Chlorella_fus     -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGATACGGG   [435]
Ankistrodesmus    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGATACGGG   [433]
Pseudotreb_gig    -CATC---GGAAGGCAGC--GCGC-C--ATTACCC-AATCCTG-T-CAGG   [409]
Pleurastr_terr    -CATCCA-GGAAGGCAGC--GCGCGC--ATTACCC-AATCCTGA---GGG   [422]
Characium_per     -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATACTGACACAGT   [433]
Parietochl_pse    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [434]
Friedmannia_is    -CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCC-AATCCTGACACAGG   [434]

[                          460       470       480       490       500]
[                          .         .         .         .         .]

Glycine_max       GAGGTAGTGACAATAAATAACAATACCGGGCTC-ATTGAGTCTGGTAATT   [487]
Oryza_sativa      GAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATT   [488]
Zamia_pumila      GAGGTAGTGACAATAAATAACAATACTGGGCTCATC-GAGTCTGGTAATT   [488]
Psilotum_n        GAGGTAGTGACAATAAATAA-AATACTGGGCTTTTCAAAGTCTGGTAATT   [484]
Equisetum_ar      GAGGTAGTGACAATAAATAACAATACTGGGCTTTTACAAGTCTGGTAATT   [481]
Atrichum_angus    GAGGTAGT-ACAATAAATAACAATACTGGGCTTTTACAAGTCTGGTAATT   [462]
Notothylas_bre    GAGGTAGTGACAATAAATAACAATACTGGGCTTTTACAAGTCTGGTAATT   [453]
Phaeoceros_lae    GAGGTAGTGACAATAAATAACAATACTGGGCTTTTACAAGTCTGGTAATT   [462]
Porella_pi        ?AGGTAGTGACAATAAATAACAATACTGGGCTTTACCAAGTCTGGTAATT   [482]
Conocephal_con    G-GGT-GTGACAATAAATAACAATACTGGGCTTTTACAAGTCTGGTAATT   [478]
Asterella_tene    GAGG-AGTGACAATAAATAACAATACTGGGCT-TTACAAGTCTGGTAATT   [463]
Riccia            GA--TAGTGACAATAAATAACAATAGTGGGCT-TTACAA-TC--GTAATT   [476]
Klebsormid_fla    GAGGTAGTGAC-ATAAATAACAATGCTGGGCTTTTCAAAGTCTGGCAATT   [482]
Coleochaet_nit    GAGGTAG--ACAATAAATAACA-TACTGGGCTTTTA-AAGTCTGGT?ATT   [463]
Fissidens_taxi    GAGGTAGT-ACAATAAATAACAATACTGGGCTTTTACAAGTCTGGTAATT   [456]
Plagiomnium_cu    GAGGTAGTGACAATAAATAACAATACTGGGC--TTACGGGCCCG---ATT   [452]
Micromonas_pus    ??????????????????????????????????????????????????   [472]
Mantoniel_squa    GAGGTAGTGACAATAAATAACAATATCGGGGTTTTTCAA???????????   [454]
Nephroselm_pyr    GAGGTAGTGAC-ATAAATAACAATACCGGGCTTTTTCAAGTCTGGTAATT   [463]
Pedinomonas_mi    GAGG-AGTGGACAGAAATATCGTGACTGTGCCCTTGTGGCAGAGTCTTCG   [448]
Tetraselm_cart    GAGGTAGTGACAATAAATAACAATACCGGGCTTTT-CAA???????????   [474]
Enteromorpha      GAGGTAGTGACAATAAATATCA-TTCTGGGC-CACTTG-GTCCGGTAATT   [471]
Ulva_fasci        GAGGTA-TGACAATAAATATCAATTCTGGGC-CACAT--GTCCGGTAATT   [461]
Ulothrix_zo       -AGAT-GTGACAATA-AT-AC-ATACTGC-C-CA---G-GTCYGGT?ATT   [446]
Cympolia_barba    GAGGTAGTGACAATAAATAACAATGTTGGACTTGTAAA-GTTTGGTAATT   [494]
Batophora_oers    GAG-T-GTG-CGACAAATAACAATGCCGGGC-TTATCAAGTTTGGTAATT   [474]
Codium_decort     GAGGT-GTGACGAGACATAACAACGACGTGC-TCAACGAGTGGG-TCGAT   [483]
Cladophoro        GAGGT-GTG-C--GAAATAGCAAT--CGAGCATTT---CTCTG--CAATT   [471]
Blastophysa_rh    GAGGTAGTGACAATAAATAACAGTATCTGGC-TCT-CAGTCCG-ATGCTT   [473]
Trentepohlia      ??????????????????????????????????????????????????   [473]
Cephaleuro_par    GAGGTGGTGG???GAAATAACGATGCTCCGGCCTCTG-GTCGGG?TAATC   [454]
Characium_vac     GAGGTAGTGACAATAAATAACAATACTGGGCATTT--ATGTCTGGTAATT   [481]
Dunaliella_par    GAGGTAGTGACAATAAATAACAATACCGGGCATTT--TTGTCTGGTAATT   [480]
Chlamyd_reinha    GAGGTAGTGACAATAAATAACAATACCGGGCGCTTC-GCGTCTGGTAATT   [483]
Volvox_carteri    GAGGTAGTGACAATAAATAACAATACCGGGCGCTTA-GCGTCTGGTAATT   [483]
Chlorococc_min    GAGGTAGTGACAATAAATAACAATGCGGGGCCTA---TGGTCTTGCAATT   [480]
Draparn_plum      GAGGTAGT-ACAATAAATAACAATACCGGGCATTAA-ATGTCTGGTAATT   [461]
Uronema_belk      G-GG--GTGACAATAAATAACAATACCGGGCATTT--ATGTCTGGT--TT   [438]
Chlamydom_moew    GAGGT--TGACAATAAATAACAATA-TCGGGCATCCAATGTCTGATAATT   [460]
Stephanos_pl      GAGGTAGTGA-AAT-AATAACAATACCGGGCATTT--ATGTCTGGTAATT   [470]
Carteria_rad      GAGGTAGTGACAATAAATAACAATACTGGGCATTT--TTGTCTGGTAATT   [476]
Gonium_pecto      GAGGTAGTGACAATAAATAACAATACCGG--TC----GCGTCTGGTAATT   [464]
Chlorella_kess    GAGGTAGTGACAATAAATAACAATACCGGGCCTTTTCAGGTCTGGTAATT   [485]
Chlorella_vulg    GAGGTAGTGACAATAAATAACAATACTGGGCCTTTTCAGGTCTGGTAATT   [486]
Protothec_wic     GAGGTAGTGACAATAAATAACAATACCGGGCCT-CACAGGTCTGGTAATT   [481]
Chlorella_prot    GAGGTAGTGACAATAAATAACAATACCGGGCCT-CACAGGTCTGGTAATT   [485]
Chlorella_min     GAGGTAGTGACAATAAATAACAATACCGGGCCT-TTCAGGTCTGGTAATT   [484]
Neochloris_aqu    GAGGTAGTGACAATAAATAACAATACCGGGCACATC-GTGTCTGGTAATT   [483]
Neochloris_vig    GAGGTAGTGACAATAAATAACAATACCGGGCACATC-GTGTCTGGTAATT   [483]
Pediastrum_dup    GAGGTAGTGACAATAAATAACAATACTGGGCACTTC-GTGTCTGGTAATT   [484]
Scenedesm_obl     GAGGTAGTGACAATAAATAACAATACCGGGCATTTT-ATGTCTGGTAATT   [484]
Characium_hin     GAGGTAGTGACAATAAATAACAATACCGGGCACATC-GTGTCTGGTAATT   [481]
Chlorella_fus     GAGGTAGTGACAATAAATAACAATACCGGGCATTTC-ATGTCTGGTAATT   [484]
Ankistrodesmus    GAGGTAGTGACAATAAATAACAATACCGGGCWTTCA-ATGTCTGGTAATT   [482]
Pseudotreb_gig    GAGGTA-TGACAATAAATAACAATACCGGGCTTTTTCAAGTCTGGTAATT   [458]
Pleurastr_terr    GAGGTAGTGACAATAAATAACAATACCGGGCATTTA-ATGTCTGGTAATT   [471]
Characium_per     GAGGTAGTGACAAAAAATATCGATGGTGGGCTCTTTCGAGTTTGCCAATT   [483]
Parietochl_pse    GAGGTAGTGACAATAAATAACTATGCTTGGCTC-TTCGAGTCGGGCAATA   [483]
Friedmannia_is    GAGGTAGTGACAATAAATAACAATACCGGGCTTTTTCAAGTCTGGTAATT   [484]

[                          510       520       530       540       550]
[                          .         .         .         .         .]

Glycine_max       GGAATGAGTACAATCTAAATCCCTTAACGATGGATCCATTGAAGGGCAAG   [537]
Oryza_sativa      GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCCATTGGAGGGCAAG   [537]
Zamia_pumila      GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCCATTGGAGGGCAAG   [537]
Psilotum_n        GGAATGAGTACAATCTAAACCC????????????????????????????   [534]
Equisetum_ar      GGAATGAGTACAATCTAAATCC????????????????????????????   [531]
Atrichum_angus    GGAATGAGTACAATCTAAATCCCTTAA--A????????????????????   [510]
Notothylas_bre    GGAATGAGTACAATCTAAATCCCTTAA--A????????????????????   [501]
Phaeoceros_lae    GGAATGA-TACAATCTAAATCCCTTAAC??????????????????????   [511]
Porella_pi        GGAATGAGTACAATCTAAATCC????????????????????????????   [532]
Conocephal_con    GGAATGAGAACAATCTAAATC?????????????????????????????   [528]
Asterella_tene    GGAATGAGTACAATCTAAATCCC???????????????????????????   [513]
Riccia            GGAA--AGTACAATCTAAATCCCTTA????????????????????????   [524]
Klebsormid_fla    GGAATG????????????????????????????????????????????   [532]
Coleochaet_nit    GGAATGAGTACAATCTAAATCTC???????????????????????????   [513]
Fissidens_taxi    GGAATGAGTACAATCTAAATCCCTTAA--A????????????????????   [504]
Plagiomnium_cu    GG--TGAGTA?AATCT-AATCCCTTAA???????????????????????   [499]
Micromonas_pus    ??????????????????????????????????????????????????   [522]
Mantoniel_squa    ??????????????????????????????????????????????????   [504]
Nephroselm_pyr    GGAATG????????????????????????????????????????????   [513]
Pedinomonas_mi    ??????????????????????????????????????????????????   [498]
Tetraselm_cart    ??????????????????????????????????????????????????   [524]
Enteromorpha      GGAATG????????????????????????????????????????????   [521]
Ulva_fasci        GGAAT?AGTACAATGTAAA?CCCT-AAC-A????????????????????   [509]
Ulothrix_zo       GGAATGAGTACAATCTAAATCCCTTA????????????????????????   [496]
Cympolia_barba    GTAATG------GAGTAA-TCC-TTGAAC?????????????????????   [536]
Batophora_oers    GGAATGAGT--AACGTAAAYGCCTTA????????????????????????   [522]
Codium_decort     GG--TG-GA--AACTTAAAATCCC-CA???????????????????????   [527]
Cladophoro        GAAATGAGAA-AATTTAAACCACTTAAC-A---ATC??????????????   [516]
Blastophysa_rh    GGAAT-A-TA-AATCTAAATCCCTTAAC-A????????????????????   [519]
Trentepohlia      ??????????????????????????????????????????????????   [523]
Cephaleuro_par    GGAATGAGAA--ATTTA??TCCCTTA????????????????????????   [502]
Characium_vac     GGAATGAGTACAATGTAAATATCTTAACGA-GTATCCATTGGAGGGCAAG   [530]
Dunaliella_par    GGAATGAGTACAATCTAAATCCCTTAACGA-GTATCCATTGGAGGGCAAG   [529]
Chlamyd_reinha    GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCCATTGGAGGGCAAG   [532]
Volvox_carteri    GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCCATTGGAGGGCAAG   [532]
Chlorococc_min    GGAATGAGAACAATGTAAATATCTTAACGA-GTATCCATTGGAGGGCAAG   [529]
Draparn_plum      GGA??GA?TAC?ATCTAAATCC????????????????????????????   [511]
Uronema_belk      GGAATGAGTACAATCTAA??CCCTTAA???????????????????????   [488]
Chlamydom_moew    GGAATG????????????????????????????????????????????   [510]
Stephanos_pl      GGA-TGAGTACAATGTAAATAT????????????????????????????   [519]
Carteria_rad      GGAATGAGTACAATCTAAATCC????????????????????????????   [526]
Gonium_pecto      GGA?TGAGT?CAATCTAAATCC????????????????????????????   [514]
Chlorella_kess    GGAATGAGTACAATCTAAACCCCTTAACGA-GGATCAATTGGAGGGCAAG   [534]
Chlorella_vulg    GGAATGAGTACAATCTAAACCCCTTAACGA-GGATCAATTGGAGGGCAAG   [535]
Protothec_wic     GGAATGAGTACAACCTAAACACCTTAACGA-GGATCAATTGGAGGGCAAG   [530]
Chlorella_prot    GGAATGAGTACAATCTAAACCCCTTAACGA-GGATCAATTGGAGGGCAAG   [534]
Chlorella_min     GGAATGAGTACAATCTAAACCCCTTAACGA-GGATCAATTGGAGGGCAAG   [533]
Neochloris_aqu    GGAATGAGTACAATCTAAATCCCTTAACGA-GTATCCATTGGAGGGCAAG   [532]
Neochloris_vig    GGAATGAGTACAATCTAAATCCCTTAACGA-GTATCCATTGGAGGGCAAG   [532]
Pediastrum_dup    GGAATGAGTACAATCTAAATCCCTTAACGA-GTATCCATTGGAGGGCAAG   [533]
Scenedesm_obl     GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCCATTGGAGGGCAAG   [533]
Characium_hin     GGAATGAGTACAATCTAAATCCCTTAACGA-GTATCAATTGGAGGGCAAG   [530]
Chlorella_fus     GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCCATTGGAGGGCAAG   [533]
Ankistrodesmus    GGAATGAGTACAATTTAAATCCCTTAACGA-GGATCCATTGGAGGGCAAG   [531]
Pseudotreb_gig    GGAT??????????????????????????????????????????????   [508]
Pleurastr_terr    GGAATG????????????????????????????????????????????   [521]
Characium_per     GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCAATTGGAGGGCAAG   [532]
Parietochl_pse    GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCAATTGGAGGGCAAG   [532]
Friedmannia_is    GGAATGAGTACAATCTAAATCCCTTAACGA-GGATCAATTGGAGGGCAAG   [533]

[                          560       570       580       590       600]
[                          .         .         .         .         .]

Glycine_max       TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [587]
Oryza_sativa      TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [587]
Zamia_pumila      TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [587]
Psilotum_n        ??????????????????????????????????????????????????   [584]
Equisetum_ar      ??????????????????????????????????????????????????   [581]
Atrichum_angus    ??????????????????????????????????????????????????   [560]
Notothylas_bre    ??????????????????????????????????????????????????   [551]
Phaeoceros_lae    ??????????????????????????????????????????????????   [561]
Porella_pi        ??????????????????????????????????????????????????   [582]
Conocephal_con    ??????????????????????????????????????????????????   [578]
Asterella_tene    ??????????????????????????????????????????????????   [563]
Riccia            ??????????????????????????????????????????????????   [574]
Klebsormid_fla    ??????????????????????????????????????????????????   [582]
Coleochaet_nit    ??????????????????????????????????????????????????   [563]
Fissidens_taxi    ??????????????????????????????????????????????????   [554]
Plagiomnium_cu    ??????????????????????????????????????????????????   [549]
Micromonas_pus    ??????????????????????????????????????????????????   [572]
Mantoniel_squa    ??????????????????????????????????????????????????   [554]
Nephroselm_pyr    ??????????????????????????????????????????????????   [563]
Pedinomonas_mi    ??????????????????????????????????????????????????   [548]
Tetraselm_cart    ??????????????????????????????????????????????????   [574]
Enteromorpha      ??????????????????????????????????????????????????   [571]
Ulva_fasci        ??????????????????????????????????????????????????   [559]
Ulothrix_zo       ??????????????????????????????????????????????????   [546]
Cympolia_barba    ??????????????????????????????????????????????????   [586]
Batophora_oers    ??????????????????????????????????????????????????   [572]
Codium_decort     ??????????????????????????????????????????????????   [577]
Cladophoro        ??????????????????????????????????????????????????   [566]
Blastophysa_rh    ??????????????????????????????????????????????????   [569]
Trentepohlia      ??????????????????????????????????????????????????   [573]
Cephaleuro_par    ??????????????????????????????????????????????????   [552]
Characium_vac     TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [580]
Dunaliella_par    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [579]
Chlamyd_reinha    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [582]
Volvox_carteri    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [582]
Chlorococc_min    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [579]
Draparn_plum      ??????????????????????????????????????????????????   [561]
Uronema_belk      ??????????????????????????????????????????????????   [538]
Chlamydom_moew    ??????????????????????????????????????????????????   [560]
Stephanos_pl      ??????????????????????????????????????????????????   [569]
Carteria_rad      ??????????????????????????????????????????????????   [576]
Gonium_pecto      ??????????????????????????????????????????????????   [564]
Chlorella_kess    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [584]
Chlorella_vulg    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [585]
Protothec_wic     TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [580]
Chlorella_prot    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [584]
Chlorella_min     TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [583]
Neochloris_aqu    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [582]
Neochloris_vig    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [582]
Pediastrum_dup    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [583]
Scenedesm_obl     TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [583]
Characium_hin     TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [580]
Chlorella_fus     TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [583]
Ankistrodesmus    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [581]
Pseudotreb_gig    ??????????????????????????????????????????????????   [558]
Pleurastr_terr    ??????????????????????????????????????????????????   [571]
Characium_per     TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [582]
Parietochl_pse    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [582]
Friedmannia_is    TCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAG   [583]

[                          610       620       630       640       650]
[                          .         .         .         .         .]

Glycine_max       TTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGTTGGGTCGATC-GG   [636]
Oryza_sativa      TTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGCGCGGCCGGGCCGG   [637]
Zamia_pumila      TTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGACGGCCCGGCC-GG   [636]
Psilotum_n        ??????????????????????????????????????????????????   [634]
Equisetum_ar      ??????????????????????????????????????????????????   [631]
Atrichum_angus    ??????????????????????????????????????????????????   [610]
Notothylas_bre    ??????????????????????????????????????????????????   [601]
Phaeoceros_lae    ??????????????????????????????????????????????????   [611]
Porella_pi        ??????????????????????????????????????????????????   [632]
Conocephal_con    ??????????????????????????????????????????????????   [628]
Asterella_tene    ??????????????????????????????????????????????????   [613]
Riccia            ??????????????????????????????????????????????????   [624]
Klebsormid_fla    ??????????????????????????????????????????????????   [632]
Coleochaet_nit    ??????????????????????????????????????????????????   [613]
Fissidens_taxi    ??????????????????????????????????????????????????   [604]
Plagiomnium_cu    ??????????????????????????????????????????????????   [599]
Micromonas_pus    ??????????????????????????????????????????????????   [622]
Mantoniel_squa    ??????????????????????????????????????????????????   [604]
Nephroselm_pyr    ??????????????????????????????????????????????????   [613]
Pedinomonas_mi    ??????????????????????????????????????????????????   [598]
Tetraselm_cart    ??????????????????????????????????????????????????   [624]
Enteromorpha      ??????????????????????????????????????????????????   [621]
Ulva_fasci        ??????????????????????????????????????????????????   [609]
Ulothrix_zo       ??????????????????????????????????????????????????   [596]
Cympolia_barba    ??????????????????????????????????????????????????   [636]
Batophora_oers    ??????????????????????????????????????????????????   [622]
Codium_decort     ??????????????????????????????????????????????????   [627]
Cladophoro        ??????????????????????????????????????????????????   [616]
Blastophysa_rh    ??????????????????????????????????????????????????   [619]
Trentepohlia      ??????????????????????????????????????????????????   [623]
Cephaleuro_par    ??????????????????????????????????????????????????   [602]
Characium_vac     TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGATGTGTTGTCGC-GG   [629]
Dunaliella_par    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTTGTAGC-GG   [628]
Chlamyd_reinha    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGGTGGTGC-GG   [631]
Volvox_carteri    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGGTGGTGC-GG   [631]
Chlorococc_min    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGACCACGC-GG   [628]
Draparn_plum      ??????????????????????????????????????????????????   [611]
Uronema_belk      ??????????????????????????????????????????????????   [588]
Chlamydom_moew    ??????????????????????????????????????????????????   [610]
Stephanos_pl      ??????????????????????????????????????????????????   [619]
Carteria_rad      ??????????????????????????????????????????????????   [626]
Gonium_pecto      ??????????????????????????????????????????????????   [614]
Chlorella_kess    TTGCTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGCGGGGCCTGCC-GG   [633]
Chlorella_vulg    TTGCTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGACCTGCC-GG   [634]
Protothec_wic     TTGCTGCAGTTAAAAAGCTCGTAGTTGGATTTCGAGGTCGTCCTGCT-GG   [629]
Chlorella_prot    TTGCTGCAGTTAAAAAGCTCGTAGTCGAACTTCGGGGGGCCCGGGCC-GG   [633]
Chlorella_min     TTGCTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGGCACGTC-GG   [632]
Neochloris_aqu    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTTCTAGC-GG   [631]
Neochloris_vig    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTTCTAGC-GG   [631]
Pediastrum_dup    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTTCTAGC-GG   [632]
Scenedesm_obl     TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTTCTAGC-GG   [632]
Characium_hin     TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTTCTAGC-GG   [629]
Chlorella_fus     TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTTCTAGC-GG   [632]
Ankistrodesmus    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTAGGTTCCATC-GG   [630]
Pseudotreb_gig    ??????????????????????????????????????????????????   [608]
Pleurastr_terr    ??????????????????????????????????????????????????   [621]
Characium_per     TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGCGGAGCC-GA   [631]
Parietochl_pse    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGTCGCGCC-GG   [631]
Friedmannia_is    TTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCGGGTGGGCGCTACC-GG   [632]

[                          660       670       680       690       700]
[                          .         .         .         .         .]

Glycine_max       TCCGCC-TCC--GTGTGCACCGGTC-GGCT--GTCCCTTCTGCCGGCGAT   [680]
Oryza_sativa      TCCGCC-TCACGGCAGGCACCGACCTGCT--CGACCCTTCTGCCGGCGAT   [684]
Zamia_pumila      TCCGCT-TTTTTGGGTGTGCACCGGCCGTTTCGTCCCTTTTGTTGGCGGC   [685]
Psilotum_n        ??????????????????????????????????????????????????   [684]
Equisetum_ar      ??????????????????????????????????????????????????   [681]
Atrichum_angus    ??????????????????????????????????????????????????   [660]
Notothylas_bre    ??????????????????????????????????????????????????   [651]
Phaeoceros_lae    ??????????????????????????????????????????????????   [661]
Porella_pi        ??????????????????????????????????????????????????   [682]
Conocephal_con    ??????????????????????????????????????????????????   [678]
Asterella_tene    ??????????????????????????????????????????????????   [663]
Riccia            ??????????????????????????????????????????????????   [674]
Klebsormid_fla    ??????????????????????????????????????????????????   [682]
Coleochaet_nit    ??????????????????????????????????????????????????   [663]
Fissidens_taxi    ??????????????????????????????????????????????????   [654]
Plagiomnium_cu    ??????????????????????????????????????????????????   [649]
Micromonas_pus    ??????????????????????????????????????????????????   [672]
Mantoniel_squa    ??????????????????????????????????????????????????   [654]
Nephroselm_pyr    ??????????????????????????????????????????????????   [663]
Pedinomonas_mi    ??????????????????????????????????????????????????   [648]
Tetraselm_cart    ??????????????????????????????????????????????????   [674]
Enteromorpha      ??????????????????????????????????????????????????   [671]
Ulva_fasci        ??????????????????????????????????????????????????   [659]
Ulothrix_zo       ??????????????????????????????????????????????????   [646]
Cympolia_barba    ??????????????????????????????????????????????????   [686]
Batophora_oers    ??????????????????????????????????????????????????   [672]
Codium_decort     ??????????????????????????????????????????????????   [677]
Cladophoro        ??????????????????????????????????????????????????   [666]
Blastophysa_rh    ??????????????????????????????????????????????????   [669]
Trentepohlia      ??????????????????????????????????????????????????   [673]
Cephaleuro_par    ??????????????????????????????????????????????????   [652]
Characium_vac     TCTGCC-TCT-GGTACGTACTGCGTTCGA---GCATCTTTCTGCTGGGGA   [674]
Dunaliella_par    TCAGCC-TTT-GGTGAGTACTGCTACGGC---CCACCTTTCTGCCGGGGA   [673]
Chlamyd_reinha    TCCGCC-TCT-GGTGTGCACTGCTCTGCT---CCACCTTCCTGCCGGGGA   [676]
Volvox_carteri    TCCGCC-TCT-GGTGTGCACTGCTCTGCT---CCACCTTCCTGCCGGGGA   [676]
Chlorococc_min    TCTGCC-TCT-GGTACGTACTGCGCCTGG---CCACCTTTCTGCTGGGGA   [673]
Draparn_plum      ??????????????????????????????????????????????????   [661]
Uronema_belk      ??????????????????????????????????????????????????   [638]
Chlamydom_moew    ??????????????????????????????????????????????????   [660]
Stephanos_pl      ??????????????????????????????????????????????????   [669]
Carteria_rad      ??????????????????????????????????????????????????   [676]
Gonium_pecto      ??????????????????????????????????????????????????   [664]
Chlorella_kess    TCCGCCGTTTCGGTGTGCACTGGCAGGGC----CGCCTTGTTGCCGGGGA   [679]
Chlorella_vulg    TCCGCCGTTTCGGTGTGCACTGGCAGGGC---TCACCTTGTTGCCGGGGA   [681]
Protothec_wic     TCCGCCGTTTCGGTGTGCACTGGCGCGGC---GGTCTTTGTTGCTGGGGA   [676]
Chlorella_prot    TCCCCCCGCCCTCTGCGCACTGGCATGGCG--CCCCCCTGTTGCTGGGGA   [681]
Chlorella_min     TCCGCCGTTTCGGTGTGCACTGGCGGGGC---CCACCTTGTTGCCGGGGA   [679]
Neochloris_aqu    TCCGCC-TAT-GGTGAGTACTGCTATGGC---CTTCCTTTCTGCCGGGGA   [676]
Neochloris_vig    TCCGCC-TCT-GGTGAGTACTGCTATGGC---CTTCCTTTCTGCCGGGGA   [676]
Pediastrum_dup    TCCGCC-TAT-GGTGAGTACTGCTACGGC---CTCCCTTTCTGCCGGGGA   [677]
Scenedesm_obl     TCCGCC-TAT-GGTGAGTACTGCTATGGC---CTTCCTTTCTGTCGGGGA   [677]
Characium_hin     TCCGCC-TAT-GGTGAGTACTGCTATGGC---CTTCCTTTCTGCCGGGGA   [674]
Chlorella_fus     TCCGCC-TAT-GGTGAGTACTGCTATGGC---CTTCCTTTCTGTCGGGGA   [677]
Ankistrodesmus    TCCGCC-TAT-GGTGAGTACTGCTGTGGC---CTTCCTTTTTGCCGGGGA   [675]
Pseudotreb_gig    ??????????????????????????????????????????????????   [658]
Pleurastr_terr    ??????????????????????????????????????????????????   [671]
Characium_per     TCTGCCCTTTGGGTATGCATTGGCTTTGC---CTATCTTGCTGCCGGGGA   [678]
Parietochl_pse    TCCGCCGTTTCGGTGTGCACTGGCGTGGC---CCACCTTGCTGCCGGGGA   [678]
Friedmannia_is    TCCGCCGATTCGGTGTGCACTGGTCGCGC---CCATCTTGCTGCCGGGGA   [679]

[                          710       720       730       740       750]
[                          .         .         .         .         .]

Glycine_max       GCG---CTCCTGTCCTTAACTGGCCGGG-TCGTGCC-TCC-GGTGCTGTT   [724]
Oryza_sativa      GCG---CTCCTGGCCTTAACTGGCCGGGTTCGTGCC-TCC-GGCGCCGTT   [729]
Zamia_pumila      GCG---CACCTGGCCTTAACTGTCTGGG-TCGCGGT-TCC--ACGCTGTT   [728]
Psilotum_n        ??????????????????????????????????????????????????   [734]
Equisetum_ar      ??????????????????????????????????????????????????   [731]
Atrichum_angus    ??????????????????????????????????????????????????   [710]
Notothylas_bre    ??????????????????????????????????????????????????   [701]
Phaeoceros_lae    ??????????????????????????????????????????????????   [711]
Porella_pi        ??????????????????????????????????????????????????   [732]
Conocephal_con    ??????????????????????????????????????????????????   [728]
Asterella_tene    ??????????????????????????????????????????????????   [713]
Riccia            ??????????????????????????????????????????????????   [724]
Klebsormid_fla    ??????????????????????????????????????????????????   [732]
Coleochaet_nit    ??????????????????????????????????????????????????   [713]
Fissidens_taxi    ??????????????????????????????????????????????????   [704]
Plagiomnium_cu    ??????????????????????????????????????????????????   [699]
Micromonas_pus    ??????????????????????????????????????????????????   [722]
Mantoniel_squa    ??????????????????????????????????????????????????   [704]
Nephroselm_pyr    ??????????????????????????????????????????????????   [713]
Pedinomonas_mi    ??????????????????????????????????????????????????   [698]
Tetraselm_cart    ??????????????????????????????????????????????????   [724]
Enteromorpha      ??????????????????????????????????????????????????   [721]
Ulva_fasci        ??????????????????????????????????????????????????   [709]
Ulothrix_zo       ??????????????????????????????????????????????????   [696]
Cympolia_barba    ??????????????????????????????????????????????????   [736]
Batophora_oers    ??????????????????????????????????????????????????   [722]
Codium_decort     ??????????????????????????????????????????????????   [727]
Cladophoro        ??????????????????????????????????????????????????   [716]
Blastophysa_rh    ??????????????????????????????????????????????????   [719]
Trentepohlia      ??????????????????????????????????????????????????   [723]
Cephaleuro_par    ??????????????????????????????????????????????????   [702]
Characium_vac     CGAG--CTCCTGGGCTTAATTGTCTGGG-ACTCGGAATC--AGCGAAGTG   [719]
Dunaliella_par    CGTG--CTCCTGGGCTTAACTGTCCGGG-ACACGGAATC--GGCGAGGTT   [718]
Chlamyd_reinha    CGGG--CTCCTGGGCTTCACTGTCTGGG-ACTCGGAGTC--GGCGAGGTT   [721]
Volvox_carteri    CGGG--CTCCTGGGCTTCACTGTATGGG-ACTCGGAGTC--GGCGAGGTT   [721]
Chlorococc_min    CG-C--CTCCTGGGCTTCACTGTCTGGGGGGTGGGAGTC--AGCGAAGTG   [718]
Draparn_plum      ??????????????????????????????????????????????????   [711]
Uronema_belk      ??????????????????????????????????????????????????   [688]
Chlamydom_moew    ??????????????????????????????????????????????????   [710]
Stephanos_pl      ??????????????????????????????????????????????????   [719]
Carteria_rad      ??????????????????????????????????????????????????   [726]
Gonium_pecto      ??????????????????????????????????????????????????   [714]
Chlorella_kess    CGGG--CTCCTGGGCTTCACTGTCCGGG-ACTCGGAGTC--GGCGCTGTT   [724]
Chlorella_vulg    CGGG--CTCCTGGGCTTCACTGTCCGGG-ACTCGGAGTC--GGCGCTGTT   [726]
Protothec_wic     CGTG--CTCCTGGGCTTCACTGTCCGGG-ACTCGGAGTC--AGCGAGGTT   [721]
Chlorella_prot    CGGCG-CTCCTGGGCTTTGCTGTCCGGG-GCCCGGAGTC--AGCGAGGTT   [727]
Chlorella_min     CGGG--CTCCTGGGATTCA-TTTCCTGGGACTCGGAGTC--GGCGAGGTT   [724]
Neochloris_aqu    CGGG--CTCCTGGGCTTAACTGTCCGGG-ACTCGGAGTC--GGCGTTGTT   [721]
Neochloris_vig    CGG---CTCCTGGGCTTGACTGTCCGGG-ACTCGGAGTC--GGCGTTGTT   [720]
Pediastrum_dup    CGAG--TTGCTGGGCTTCACTGTCCGGT-GCTTGGAGTC--GGCGTTGTT   [722]
Scenedesm_obl     CGGG--CTTCTGGGCTTCACTGTCCGGG-ACTCGGAGTC--GACGTGGTT   [722]
Characium_hin     CGGG--CTCCTGGGATTAACTTATCGGG-ACTCGGAGTC--GGCGTTGTT   [719]
Chlorella_fus     CGGG--CTTCTGGGCTTAATTGTCCGGG-ACTCGGAGTC--GACGTGGTT   [722]
Ankistrodesmus    CGGT--CTCCTGGGCTTCACTGTCCGGG-AATCGGAGTC--GGCGATGAT   [720]
Pseudotreb_gig    ??????????????????????????????????????????????????   [708]
Pleurastr_terr    ??????????????????????????????????????????????????   [721]
Characium_per     -GGCG-CTCCTGGGCTTCATTGCTCGGG-ACGTTTAGTC--GGCGAGGTT   [723]
Parietochl_pse    CGGG--CTCCTGGGCTTCACTGTCCGGG-ACTCGGAGTC--GGCGAGGTT   [723]
Friedmannia_is    CAGG--CTGCTGGGCTTAACTGTCTGGC-ACCTGGAGTC--GGCGAGGTT   [724]

[                          760       770       780       790       800]
[                          .         .         .         .         .]

Glycine_max       ACTTTGAAGAAATTAGAGTGCTCAAAGCAAGC-CTACGCTCTGTATACAT   [773]
Oryza_sativa      ACTTTGAAGAAATTAGAGTGCTCAAAGCAAGC-CATCGCTCTGGATACAT   [778]
Zamia_pumila      ACTTTGAAAAAATTAGAGTGCTCAAAGCAAGC-TTATGCTCTGAATACAT   [777]
Psilotum_n        ??????????????????????????????????????????????????   [784]
Equisetum_ar      ??????????????????????????????????????????????????   [781]
Atrichum_angus    ??????????????????????????????????????????????????   [760]
Notothylas_bre    ??????????????????????????????????????????????????   [751]
Phaeoceros_lae    ??????????????????????????????????????????????????   [761]
Porella_pi        ??????????????????????????????????????????????????   [782]
Conocephal_con    ??????????????????????????????????????????????????   [778]
Asterella_tene    ??????????????????????????????????????????????????   [763]
Riccia            ??????????????????????????????????????????????????   [774]
Klebsormid_fla    ??????????????????????????????????????????????????   [782]
Coleochaet_nit    ??????????????????????????????????????????????????   [763]
Fissidens_taxi    ??????????????????????????????????????????????????   [754]
Plagiomnium_cu    ??????????????????????????????????????????????????   [749]
Micromonas_pus    ??????????????????????????????????????????????????   [772]
Mantoniel_squa    ??????????????????????????????????????????????????   [754]
Nephroselm_pyr    ??????????????????????????????????????????????????   [763]
Pedinomonas_mi    ??????????????????????????????????????????????????   [748]
Tetraselm_cart    ??????????????????????????????????????????????????   [774]
Enteromorpha      ??????????????????????????????????????????????????   [771]
Ulva_fasci        ??????????????????????????????????????????????????   [759]
Ulothrix_zo       ??????????????????????????????????????????????????   [746]
Cympolia_barba    ??????????????????????????????????????????????????   [786]
Batophora_oers    ??????????????????????????????????????????????????   [772]
Codium_decort     ??????????????????????????????????????????????????   [777]
Cladophoro        ??????????????????????????????????????????????????   [766]
Blastophysa_rh    ??????????????????????????????????????????????????   [769]
Trentepohlia      ??????????????????????????????????????????????????   [773]
Cephaleuro_par    ??????????????????????????????????????????????????   [752]
Characium_vac     ACCTTGAGCAAACAAGAGTGTTCAAAGCAAGC-CTACGCTCTGAATTTTT   [768]
Dunaliella_par    ACTTTGAGTAAATTAGAGTGTTCAAAGCAAGC-CTACGCTCTGAATACAT   [767]
Chlamyd_reinha    ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTCTGAATACAT   [770]
Volvox_carteri    ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTCTGAATACAT   [770]
Chlorococc_min    ACCTTGAGCAAACAAGAGAGTTCAAAGCAAGC-CTACGCTCTGAATTTTT   [767]
Draparn_plum      ??????????????????????????????????????????????????   [761]
Uronema_belk      ??????????????????????????????????????????????????   [738]
Chlamydom_moew    ??????????????????????????????????????????????????   [760]
Stephanos_pl      ??????????????????????????????????????????????????   [769]
Carteria_rad      ??????????????????????????????????????????????????   [776]
Gonium_pecto      ??????????????????????????????????????????????????   [764]
Chlorella_kess    ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTCTGAATACAT   [773]
Chlorella_vulg    ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTCTGAATACAT   [775]
Protothec_wic     ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-TACCGCTCTGAATACAT   [770]
Chlorella_prot    ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-ATCCGCTCTGAATACAT   [776]
Chlorella_min     ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTCTGAATACAT   [773]
Neochloris_aqu    ACTTTGAGTAAATTGGAGTGTTCAAAGCAAGC-CTGCGCTCTGAACATTT   [770]
Neochloris_vig    ACTTTGAGTAAATTGGAGTGTTCAAAGCAAGC-CTGCGCTCTGAACATTT   [769]
Pediastrum_dup    ACTTTGAGTAAATTAGAGTGTTCAAAGCAACG-ATACGCCCTGAATACTT   [771]
Scenedesm_obl     ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-TTACGCCA-GAATACTT   [770]
Characium_hin     ACTTTGAGTAAATTAGAGTGTTCAAAGCAAGC-CTGCGCTCTGAATACTT   [768]
Chlorella_fus     ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-TTACGCCCTGAATACTT   [771]
Ankistrodesmus    ACTTTGAGTAAATTAGAGTGTTCAAAGCAAGC-CTACGCTCTGAATACTT   [769]
Pseudotreb_gig    ??????????????????????????????????????????????????   [758]
Pleurastr_terr    ??????????????????????????????????????????????????   [771]
Characium_per     ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTTTGCATACAT   [772]
Parietochl_pse    ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTCTGAATACAT   [772]
Friedmannia_is    ACTTTGAGTAAATTAGAGTGTTCAAAGCAGGC-CTACGCTCTGAATACAT   [773]

[                          810       820       830       840       850]
[                          .         .         .         .         .]

Glycine_max       TAGCATGGGATAACACCACAGGATTCTGATCCTATTGTGTTGGCCTTCGG   [823]
Oryza_sativa      TAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGG   [828]
Zamia_pumila      TAGCATGGAATAACGGTATAGGATTCTGGTCCTATTGCGTTGGCCTTCGG   [827]
Psilotum_n        ??????????????????????????????????????????????????   [834]
Equisetum_ar      ??????????????????????????????????????????????????   [831]
Atrichum_angus    ??????????????????????????????????????????????????   [810]
Notothylas_bre    ??????????????????????????????????????????????????   [801]
Phaeoceros_lae    ??????????????????????????????????????????????????   [811]
Porella_pi        ??????????????????????????????????????????????????   [832]
Conocephal_con    ??????????????????????????????????????????????????   [828]
Asterella_tene    ??????????????????????????????????????????????????   [813]
Riccia            ??????????????????????????????????????????????????   [824]
Klebsormid_fla    ??????????????????????????????????????????????????   [832]
Coleochaet_nit    ??????????????????????????????????????????????????   [813]
Fissidens_taxi    ??????????????????????????????????????????????????   [804]
Plagiomnium_cu    ??????????????????????????????????????????????????   [799]
Micromonas_pus    ??????????????????????????????????????????????????   [822]
Mantoniel_squa    ??????????????????????????????????????????????????   [804]
Nephroselm_pyr    ??????????????????????????????????????????????????   [813]
Pedinomonas_mi    ??????????????????????????????????????????????????   [798]
Tetraselm_cart    ??????????????????????????????????????????????????   [824]
Enteromorpha      ??????????????????????????????????????????????????   [821]
Ulva_fasci        ??????????????????????????????????????????????????   [809]
Ulothrix_zo       ??????????????????????????????????????????????????   [796]
Cympolia_barba    ??????????????????????????????????????????????????   [836]
Batophora_oers    ??????????????????????????????????????????????????   [822]
Codium_decort     ??????????????????????????????????????????????????   [827]
Cladophoro        ??????????????????????????????????????????????????   [816]
Blastophysa_rh    ??????????????????????????????????????????????????   [819]
Trentepohlia      ??????????????????????????????????????????????????   [823]
Cephaleuro_par    ??????????????????????????????????????????????????   [802]
Characium_vac     TAGCATGGAATCACACGATAGGACTCTGG-CCTATCTTGTTGGTCTGTAG   [817]
Dunaliella_par    TAGCATGGAATAACACGATAGGACTCTGG-CTTATCTTGTTGGTCTGTAA   [816]
Chlamyd_reinha    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCT-GTTGGTCTGTGG   [818]
Volvox_carteri    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCT-GTTGGTCTGTGG   [818]
Chlorococc_min    TAGCATGGAATCACACGATAGGACTGTGG-CCTATCTTGTTGGTCTGTGG   [816]
Draparn_plum      ??????????????????????????????????????????????????   [811]
Uronema_belk      ??????????????????????????????????????????????????   [788]
Chlamydom_moew    ??????????????????????????????????????????????????   [810]
Stephanos_pl      ??????????????????????????????????????????????????   [819]
Carteria_rad      ??????????????????????????????????????????????????   [826]
Gonium_pecto      ??????????????????????????????????????????????????   [814]
Chlorella_kess    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCCTGTTGGTCTGTAG   [822]
Chlorella_vulg    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCCTGTTGGTCTGTAG   [824]
Protothec_wic     TAGCATGGAATAACATGATAGGACTCTGG-CTTATCTTGTTGGTCTGTAA   [819]
Chlorella_prot    TAGCATGGAATAACATGATAGGACTCTGG-CTTATCACGTTGGTCTGTAA   [825]
Chlorella_min     TAGCATGGAATAACACGATAGGACTCTGG-CCTATCCTGTTGGTCTGTAG   [822]
Neochloris_aqu    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCCTGTTGGTCTGTAG   [819]
Neochloris_vig    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCCTGTTGGTCTGTAG   [818]
Pediastrum_dup    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCTTGTTGGTCTGTAG   [820]
Scenedesm_obl     TAGCATGGAATAACACGATAGGACTCTGG-CCTATCTTGTTGGTCTGTAG   [819]
Characium_hin     TAGCATGGAATAACACGATAGGACTCTGG-CCTATCTTGTTGGTCTGTAG   [817]
Chlorella_fus     TAGCATGGAATAACACGATAGGACTCTGG-CCTATCTTGTTGGTCTGTAG   [820]
Ankistrodesmus    TAGCATGGAATATCGCGATAGGACTCTGG-CCTATCTCGTTGGTCTGTAG   [818]
Pseudotreb_gig    ??????????????????????????????????????????????????   [808]
Pleurastr_terr    ??????????????????????????????????????????????????   [821]
Characium_per     CAGCATGGAATATCACGAGAGGACTCTGG-CCTATCTTGTTGGTCTGTGG   [821]
Parietochl_pse    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCTTGTTGGTCTGTGG   [821]
Friedmannia_is    TAGCATGGAATAACACGATAGGACTCTGG-CCTATCTCGTTGGTCTGTGG   [822]

[                          860       870       880       890       900]
[                          .         .         .         .         .]

Glycine_max       GATCGGA-GTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATA   [872]
Oryza_sativa      GATCGGA-GTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATA   [877]
Zamia_pumila      GACCGGA-GTAATGATTAACAGGGACGGTCGGGGGCATTCGTATTTCATT   [876]
Psilotum_n        ??????????????????????????????????????????????????   [884]
Equisetum_ar      ??????????????????????????????????????????????????   [881]
Atrichum_angus    ??????????????????????????????????????????????????   [860]
Notothylas_bre    ??????????????????????????????????????????????????   [851]
Phaeoceros_lae    ??????????????????????????????????????????????????   [861]
Porella_pi        ??????????????????????????????????????????????????   [882]
Conocephal_con    ??????????????????????????????????????????????????   [878]
Asterella_tene    ??????????????????????????????????????????????????   [863]
Riccia            ??????????????????????????????????????????????????   [874]
Klebsormid_fla    ??????????????????????????????????????????????????   [882]
Coleochaet_nit    ??????????????????????????????????????????????????   [863]
Fissidens_taxi    ??????????????????????????????????????????????????   [854]
Plagiomnium_cu    ??????????????????????????????????????????????????   [849]
Micromonas_pus    ??????????????????????????????????????????????????   [872]
Mantoniel_squa    ??????????????????????????????????????????????????   [854]
Nephroselm_pyr    ??????????????????????????????????????????????????   [863]
Pedinomonas_mi    ??????????????????????????????????????????????????   [848]
Tetraselm_cart    ??????????????????????????????????????????????????   [874]
Enteromorpha      ??????????????????????????????????????????????????   [871]
Ulva_fasci        ??????????????????????????????????????????????????   [859]
Ulothrix_zo       ??????????????????????????????????????????????????   [846]
Cympolia_barba    ??????????????????????????????????????????????????   [886]
Batophora_oers    ??????????????????????????????????????????????????   [872]
Codium_decort     ??????????????????????????????????????????????????   [877]
Cladophoro        ??????????????????????????????????????????????????   [866]
Blastophysa_rh    ??????????????????????????????????????????????????   [869]
Trentepohlia      ??????????????????????????????????????????????????   [873]
Cephaleuro_par    ??????????????????????????????????????????????????   [852]
Characium_vac     GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [866]
Dunaliella_par    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [865]
Chlamyd_reinha    GACCGGA-GTAATGATTAAGAGGGGTAGTCGGGGGCATTCGTATTCCGTT   [867]
Volvox_carteri    GATCGGA-GTAATGATTAAGAGGGGTAGTCGGGGGCATTCGTATTCCGTT   [867]
Chlorococc_min    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [865]
Draparn_plum      ??????????????????????????????????????????????????   [861]
Uronema_belk      ??????????????????????????????????????????????????   [838]
Chlamydom_moew    ??????????????????????????????????????????????????   [860]
Stephanos_pl      ??????????????????????????????????????????????????   [869]
Carteria_rad      ??????????????????????????????????????????????????   [876]
Gonium_pecto      ??????????????????????????????????????????????????   [864]
Chlorella_kess    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCGAT   [871]
Chlorella_vulg    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [873]
Protothec_wic     GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [868]
Chlorella_prot    GACCGGA-GTAATGATTGAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [874]
Chlorella_min     GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [871]
Neochloris_aqu    GACCAGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [868]
Neochloris_vig    GACCAGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [867]
Pediastrum_dup    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [869]
Scenedesm_obl     GACCGGA-GTAATGATTAAGAG?GACAGTCGGGGGCATTCGTATTTCATT   [868]
Characium_hin     GACCAGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [866]
Chlorella_fus     GACTGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [869]
Ankistrodesmus    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [867]
Pseudotreb_gig    ??????????????????????????????????????????????CATT   [858]
Pleurastr_terr    ??????????????????????????????????????????????????   [871]
Characium_per     GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [870]
Parietochl_pse    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [870]
Friedmannia_is    GACCGGA-GTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATT   [871]

[                          910       920       930       940       950]
[                          .         .         .         .         .]

Glycine_max       GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCA   [922]
Oryza_sativa      GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCA   [927]
Zamia_pumila      GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACCACTGCGAAAGCA   [926]
Psilotum_n        ??????????????????????????????????????????????????   [934]
Equisetum_ar      ??????????????????????????????????????????????????   [931]
Atrichum_angus    ????????????????????????????????????CTTCTGCGAAAGCA   [910]
Notothylas_bre    ??????????????????????????????????????????????????   [901]
Phaeoceros_lae    ??????????????????????????????????????????????????   [911]
Porella_pi        ??????????????????????????????????????????????????   [932]
Conocephal_con    ??????????????????????????????????????????????????   [928]
Asterella_tene    ????????????????????????????????????CTTCTGCGAAAGCA   [913]
Riccia            ????????????????????????????????????????????AAAGCA   [924]
Klebsormid_fla    ??????????????????????????????????????????????????   [932]
Coleochaet_nit    ??????????????????????????????????????????????????   [913]
Fissidens_taxi    ??????????????????????????????????????????????????   [904]
Plagiomnium_cu    ????????TGAAATTCTTGGATTTATGAAAGACGAACTTCTGCGAAAGCA   [899]
Micromonas_pus    ??????????????????????????????????????????????????   [922]
Mantoniel_squa    ??????????????????????????????????????????????????   [904]
Nephroselm_pyr    ??????????????????????????????????????????????????   [913]
Pedinomonas_mi    ??????????????????????????????????????????????????   [898]
Tetraselm_cart    ???????????????????????????????????????????????GCA   [924]
Enteromorpha      ??????????????????????????????????????????????????   [921]
Ulva_fasci        ??????????????????????????????????????????????????   [909]
Ulothrix_zo       ???????????????????????????????????????????????GCA   [896]
Cympolia_barba    ????????????????????????????????????????????AAAGCA   [936]
Batophora_oers    ???????????????????????????????GGATCCAACTGCGAAAGCA   [922]
Codium_decort     ???????????????????????????????????CCTAAGCGAAAGCAG   [927]
Cladophoro        ???????????????????????????????????????TGCGAAAGCA-   [915]
Blastophysa_rh    ??????????????????????????CCGATAGACGAACCATCTGAAGAT   [919]
Trentepohlia      ???????????????????????ACGGAAGACGAACTTCTGCGAAAGCAT   [923]
Cephaleuro_par    ??????????????????????????????????????????????????   [902]
Characium_vac     GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTTCTGCGAAAGCA   [916]
Dunaliella_par    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTTCTGCGAAAGCA   [915]
Chlamyd_reinha    GTCAGAGGTGAAATTCTTGGATTTACGGAAGACGAACATCTGCGAAAGCA   [917]
Volvox_carteri    GTCAGAGGTGAAATTCTTGGATTTACGGAAGACGAACATCTGCGAAAGCA   [917]
Chlorococc_min    GTCAGAGGTGAAATTCTTGGATTTATGAAACACGAACATCTGCGAAAGCA   [915]
Draparn_plum      ??????????????????????????????????????????????????   [911]
Uronema_belk      ???????????????????????????????????????????GAAAGCA   [888]
Chlamydom_moew    ????????TGAAATTCTTGGATTTCGGAAAGACCTACCACTGCGAA?GCA   [910]
Stephanos_pl      ??????????????????????????????????????????????????   [919]
Carteria_rad      ??????????????????????????????????????????????????   [926]
Gonium_pecto      ??????????????????????????????????????????????????   [914]
Chlorella_kess    GTCAGAGGTGAAATTCTTGGATTTTCGAAAGACGAACTACTGCGAAAGCA   [921]
Chlorella_vulg    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [923]
Protothec_wic     GTCAGAGGTGAAATTCTTGGATTTATGAAAGAC?AACTACTGCGAAAGCA   [918]
Chlorella_prot    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [924]
Chlorella_min     GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [921]
Neochloris_aqu    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [918]
Neochloris_vig    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [917]
Pediastrum_dup    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [919]
Scenedesm_obl     GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [918]
Characium_hin     GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [916]
Chlorella_fus     GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [919]
Ankistrodesmus    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [917]
Pseudotreb_gig    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTTCTGCGAAAGCA   [908]
Pleurastr_terr    ??????????????????????????????????????????????????   [921]
Characium_per     GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTTCTGCGAAAGCA   [920]
Parietochl_pse    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTACTGCGAAAGCA   [920]
Friedmannia_is    GTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACTTCTGCGAAAACG   [921]

[                          960       970       980       990       1000]
[                          .         .         .         .         .]

Glycine_max       TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [972]
Oryza_sativa      TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [977]
Zamia_pumila      TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [976]
Psilotum_n        ?????????????????????????AAGAACGAAAGTTGGG--CTCGAAG   [982]
Equisetum_ar      ?????????????????????????AAGAACGAAAGTTGG---CTCGAAG   [978]
Atrichum_angus    TTTGCCAAGGATGTTTTCATTAATCAAG???GAAAGTTGGGGGCTCGAAG   [960]
Notothylas_bre    ????????????????????????????????AAAGTTGGGG-CTCGAAG   [950]
Phaeoceros_lae    ???????????????????????????????GAAAGTTGGG--CTCGAAG   [959]
Porella_pi        ?????????????????????????AA?AAC?AAAGTTGGG--CTCGAA-   [979]
Conocephal_con    ??????AAGGATGTTT--ATTAA--AA-AA-GAAA-TTG-------GAAG   [964]
Asterella_tene    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [963]
Riccia            TTTGCCAAGGATGTTTTCATTAAT-AACAA--AAAGTTGG?GGCTCGAAG   [971]
Klebsormid_fla    ??????AAGGATGTTTTCATTAAT---GA--GAAAGTTGGGGGCTCGAAG   [977]
Coleochaet_nit    ?????????????????CATTAATCAAGAA-GAAAGTTGGGGGCTCGAAG   [962]
Fissidens_taxi    ???????????????????????????????????????????CTCGAAG   [954]
Plagiomnium_cu    TTTGCCAAGGATGTTTTCGTTAATCAA-AA-GAAAGTTGGGGGCTCGAAG   [947]
Micromonas_pus    ????????????????????????????????AAAGTTGGGGGCTCGAAG   [972]
Mantoniel_squa    ?????????????????????????????????????????????????G   [954]
Nephroselm_pyr    ????????????????????????????????????????GGGCTCGGAG   [963]
Pedinomonas_mi    ???????????????????????????????????????GGGGATCGAAG   [948]
Tetraselm_cart    TTTGTCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [974]
Enteromorpha      ????????????????????????????????????????GGGCTCGAAG   [971]
Ulva_fasci        ???????????????????????????????????????GGGGCTCGAAG   [959]
Ulothrix_zo       TT-GCCAAGGATGTTTTCATTGATCAACAA-GAAAGTTGGGGGCTC----   [940]
Cympolia_barba    TTTGTCAAGGGTATCTTCATTGATCAAGAAC---AGTTGGGGGATCG--G   [981]
Batophora_oers    TTCC----GGGCGCTCTCGTTGATCAAGAAC---AGTTGGGGGATCGAAG   [965]
Codium_decort     TCGCCAAGGACACTTCCTTGTGATCAAGA-CGAAAGTT--GGGATCGAAG   [974]
Cladophoro        TTGCCAAGGACGCTTTCATTA-GTCAAGGACGAAAGTCGGGGGATCGAAG   [964]
Blastophysa_rh    TTGCCAAGGATCGTTTTCTTTGATC------GAAAGTTGGGGGCTCGAAG   [963]
Trentepohlia      TTG-CAAGGATGTTTTCATT-GATCAAGAA-GAAAGTCGG-GGCTCGAAG   [969]
Cephaleuro_par    ??????????????????????????????????GTCGG-GGGCTCG-CG   [950]
Characium_vac     TTTGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTGGGGGCTCGAAG   [966]
Dunaliella_par    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [965]
Chlamyd_reinha    TTGGCCAAGGATACTTTCATTGATCAAGAACGAAAGTTGGGGGCTCGAAG   [967]
Volvox_carteri    TTTGCCAAGGATACTTTCATTGATCAAGAACGAAAGTTGGGGGCTCGAAG   [967]
Chlorococc_min    TTTGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTGGGGGCTCGAAG   [965]
Draparn_plum      ?????????????????????????AA???CGAAAGTT-GGGGCTCGAAG   [960]
Uronema_belk      TTTGCCAAGT?TGTCTTCATTAATCAA-AA-GAAAGTTGGGGGCTCGAAG   [936]
Chlamydom_moew    TTTGCCAAGGATGTTTTCATT?ATCAAGAA?GAAAGTAGGGGGCTCGAAG   [960]
Stephanos_pl      ???????????????????????????????????????????CTCGAAG   [969]
Carteria_rad      ?????????????????????????AA-A--GAAA-TTGG-GGCTCGAAG   [971]
Gonium_pecto      ??????????????????????????????????????????GCTCGAAG   [964]
Chlorella_kess    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [971]
Chlorella_vulg    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [973]
Protothec_wic     TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [968]
Chlorella_prot    TTTGCCAAGGATGTTTTCATTGATCAAGAACGAAAGTTGGGGGCTCGAAG   [974]
Chlorella_min     TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [971]
Neochloris_aqu    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [968]
Neochloris_vig    TTTGCCAAGGATGTTT-CATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [966]
Pediastrum_dup    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [969]
Scenedesm_obl     TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [968]
Characium_hin     TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [966]
Chlorella_fus     TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [969]
Ankistrodesmus    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [967]
Pseudotreb_gig    TTTGCCAAGGATGTTTTCATTAATC--GAA-GAAAGTTGGGGGCTCGAAG   [955]
Pleurastr_terr    ???????????????????????????????GAAAGTT-GGGGCTC-AAG   [969]
Characium_per     TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [970]
Parietochl_pse    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [970]
Friedmannia_is    TTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG   [971]

[                          1010      1020      1030      1040      1050]
[                          .         .         .         .         .]

Glycine_max       ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CCAGGG   [1020]
Oryza_sativa      ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CCAGGG   [1025]
Zamia_pumila      ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CCAGGG   [1024]
Psilotum_n        ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGG-   [1029]
Equisetum_ar      AC-ATCA?ATACCG-TCCTAGTCTCAACCATAAACGA-GC?GA-CTAGGG   [1024]
Atrichum_angus    ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1008]
Notothylas_bre    ACGATCAGATAC---TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [996]
Phaeoceros_lae    ACGAT-AG-TACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1005]
Porella_pi        ACGAT-AGATACCG-TCCTAGTCTCAACCATAAACGATGCCGAGCTAGGG   [1027]
Conocephal_con    ACGATCAGATACC---CCTAGTCTCAACCATAAACGATGCCGA-CTAG--   [1008]
Asterella_tene    ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGG-   [1010]
Riccia            ACGATCAGATACC--TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1018]
Klebsormid_fla    ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1025]
Coleochaet_nit    ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGACCTAGG-   [1010]
Fissidens_taxi    ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1002]
Plagiomnium_cu    ACGATCAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [995]
Micromonas_pus    ATGATTAGATA--A-TCCTAGTCTCAACCATAAACGATGC?GA-CTAGGG   [1018]
Mantoniel_squa    ATGATTA-ATAC-A-TC-TAGTCTC-ACCATAAACGGAYCYGA-CWA--G   [996]
Nephroselm_pyr    ATGATTAG---CCA-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1008]
Pedinomonas_mi    ACGATCAGATACC--TC-TAGTCTCTACCATAAACTAT-CCGA-CTAGGG   [993]
Tetraselm_cart    ACGATTAGATACCG-TCCTAGTCTC-ACCAT-AACGA--CCGA-C-AGGG   [1017]
Enteromorpha      ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGAT-CCGA-CCAGGG   [1018]
Ulva_fasci        ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1007]
Ulothrix_zo       ----TYAGATACCG-TCG-AG-C-CAACCATAA-CGAYGCC-A--TAGG-   [977]
Cympolia_barba    ATGATTAGATACCA-TCCTAGTCTCAACCATAAACCATGCCAA-TTAGGG   [1029]
Batophora_oers    ATGATTAGATACCA-TCCTAGTCTCAACCATAAACTATGCCAA-Y-AGGG   [1012]
Codium_decort     ATGATT--ATACCG-TCGTAGTCCCAACTGTAAACTATGCCAT-CTGGGG   [1020]
Cladophoro        ACGATTAGATA-CG-TCGTAGTCTCGACCATAAACGATGCCAA-TTAGGG   [1011]
Blastophysa_rh    ATGATTAGATACCGGTCGTAGTCTCAACCATAAAC-ATGCCCA-CTA--G   [1009]
Trentepohlia      ACGATTAGATACCG-TCGTAGTCTCGACCATAAACGATGCCGA-CTAGGG   [1017]
Cephaleuro_par    -CGCTT-GGTACCG-TCGTAGTCTCGACCATAAACGATGCCG--CTAGGG   [995]
Characium_vac     ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1014]
Dunaliella_par    ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1013]
Chlamyd_reinha    ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1015]
Volvox_carteri    ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1015]
Chlorococc_min    ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1013]
Draparn_plum      ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGG-   [1007]
Uronema_belk      ACGATTAGATACCG-T-GTAGTCTCAACCATAAACGATGCCGA-CTAGG-   [982]
Chlamydom_moew    ACGATTAGATACCG-TCGTAGTCTCTACCATAAACGATGCCGA-CCAGGG   [1008]
Stephanos_pl      ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1017]
Carteria_rad      ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1019]
Gonium_pecto      ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1012]
Chlorella_kess    ACGATTAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1019]
Chlorella_vulg    ACGATTAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1021]
Protothec_wic     ACGATTAGATACCG-TCCTAGTCTCAACCGTAAACGATGCCGA-CTAGGG   [1016]
Chlorella_prot    ACGATTAGATACCG-TCCTAGTCTCAACCGTAAACGATGCCGA-CTCGGG   [1022]
Chlorella_min     ACGATTAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1019]
Neochloris_aqu    ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1016]
Neochloris_vig    ACGATTAGATACCG-TCGTAGACTCAACCATAAACGATGCCGA-CTAGGG   [1014]
Pediastrum_dup    ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1017]
Scenedesm_obl     ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1016]
Characium_hin     ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1014]
Chlorella_fus     ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1017]
Ankistrodesmus    ACGATTAGATACCG-TCGTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1015]
Pseudotreb_gig    ACGATTAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1003]
Pleurastr_terr    WCGATT-GATACCG-T--TAGWCTCAAY--TA-WCGATGCC-A--TAGG-   [1008]
Characium_per     ACGATTAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1018]
Parietochl_pse    ACGATTAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1018]
Friedmannia_is    ACGATTAGATACCG-TCCTAGTCTCAACCATAAACGATGCCGA-CTAGGG   [1019]

[                          1060      1070      1080      1090      1100]
[                          .         .         .         .         .]

Glycine_max       ATCAGCGGATGTTGCTTTTAGGACTCCGCTGGCACCTTAT-GAGAAATCG   [1069]
Oryza_sativa      ATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTAT-GAGAAATCA   [1074]
Zamia_pumila      ATCGGCGGATGTTGCTCTAAGGACTCCGCCGGCACCTTAT-GAGAAATCA   [1073]
Psilotum_n        -TC-GCGGATGTTACCTTGATGACTCCGCCGGCACCTTAT--AGAAATC-   [1074]
Equisetum_ar      ATT--CGGATGTTACTTCAATGACTCTGCCGGCACCTTAT-GAGAAATCA   [1071]
Atrichum_angus    ATTTGCGGGTGTTAATTTGATGACCCCG-AAGCACCTTAT-GAGAAATC-   [1055]
Notothylas_bre    ATTGGCGGGTGTTAATTAGATGACTCCGCCAGCACCTTAT-GAGAAATCA   [1045]
Phaeoceros_lae    ATTGGCGGATGTTAATTAGATGACTCCGCCAGCACCTTAT-GAGAAATCA   [1054]
Porella_pi        ATTG--GGATGTTAATTTGATGACTCCGC-AGCACCTTAT-GAGAAATCA   [1073]
Conocephal_con    ATC--CGGATGT?CTTTTGATGACTCCGCCGGCACCTCCA-GAGAAATCA   [1055]
Asterella_tene    ATCG--GGATGT?GATTAGATGACTCCGCCGGCACCTCCATGAGAAATCA   [1058]
Riccia            ATCGGCGGATGT?GATTTGATGACTCCGCCGGCACCTCCT-GAGAAATCA   [1067]
Klebsormid_fla    ATTGGCGGATGTTAATTTGATGACTCCGCCAGCACCTTAT-GAGAAATC-   [1073]
Coleochaet_nit    ATCAACGGATGTTAATTTAATGACTCCGCCAGCACCTTAT--AGAAA-CA   [1057]
Fissidens_taxi    ATTGGCGGGTGTTGATTTGATGACCCCGCCAGCACCTTGA-GAGAAAT--   [1049]
Plagiomnium_cu    ATTGGCGGGTGTTGATTCGATGACCCCGCCAGCACCTTAT-GAGAAATC-   [1043]
Micromonas_pus    A--GGCGGATGTTAATT-GATGACTCCGC-AGCACCTTAT-GAGAAATCA   [1063]
Mantoniel_squa    ATTCAC--ATCTTAAT---AT--CTC--CCA-CACCTTAT--A-AAATC-   [1032]
Nephroselm_pyr    ATTGGCAGATGTTAGTTCGATGACTCTGCCAGCACCTTAT--AGAAATC-   [1055]
Pedinomonas_mi    ATTGGTGGACGTT-GTTTT?CGACTCCATCAGCACCTTAT-GAGAAATCA   [1041]
Tetraselm_cart    ATTGGCAGA--TT--TT--ATG--TCTGCCAGCACCTTAT-GAGAAAT-A   [1057]
Enteromorpha      ATTGCCGGGTGTTTTTTTGATGACTCCGCCAGCACCTCAT-GAGAAATCA   [1067]
Ulva_fasci        ATTGGCGGGGTGTTTTTTTATGACTCCGC-AGCACCTCAT-GAGAAATCA   [1055]
Ulothrix_zo       AT-GGCGGGYGTTTTTTT--TG-CTCCGC-ACA-CCTTAT-GAGAAATCA   [1020]
Cympolia_barba    ATCGTTGAGC-GTTGATTAGTGACCTCGTCGGCACCATAT-TAGAAATTA   [1077]
Batophora_oers    ATCGGC-GGGGT-CTTTA-C-GTGTCCTCGTCGGCCCCTT-GAGAAA-CA   [1056]
Codium_decort     ATCGG--GGCTG-ATGAATTGCCG-CCG-GCACCCTCCGA-GAAATTAAA   [1064]
Cladophoro        ATTGGA-GGGCGGATAGATAT-CCTCCTCCAGCACCTTCC-GCGAAAGCA   [1058]
Blastophysa_rh    ATCAGG-AG--ATTTAT-TTCGACTTCTCCGGCACTCCAT-GAGAAATCA   [1054]
Trentepohlia      ATCGGA-GG-TTTTTTTTA-TGACCTCTCCGG-ACCT--A-CAGAAATCA   [1060]
Cephaleuro_par    ATCGGA-GGTGGGTTTTTTATG-CCTCTCCGGGCACCTTC-GAGAAATCA   [1042]
Characium_vac     ATTGGCAGGTGTTCAATTGATGACCCTGCCAGCACCTTAT-GAGAAATCA   [1063]
Dunaliella_par    ATTGGCAGGTGTTTCGTTGATGACCCTGCCAGCACCTTAT-GAGAAATCA   [1062]
Chlamyd_reinha    ATTGGCAGATGTTCTTTTGATGACTCTGCCAGCACCTTAT-GAGAAATCA   [1064]
Volvox_carteri    ATTGGCAGATGTTCTTTTGATGACTCTGCCAGCACCTTAT-GAGAAATCA   [1064]
Chlorococc_min    ATTGGCGGGCGTCCTTTTGATGACCCCGCCGGCACCTTAT-GAGAAATCA   [1062]
Draparn_plum      ATCGGT?GGAGTTTTTTCGAT-ACTCCATGGGCACCTTAT-GAGAAATC-   [1054]
Uronema_belk      ATCGGTGGA--TTTTTT-----ACTCCGTGGGCACCTTAT-GAGAAATC-   [1023]
Chlamydom_moew    ATTGGCAGGTGTTCCTTTGATGACCCTGCCAGCACCTTGA-GAGAAATCA   [1057]
Stephanos_pl      ATTGGCAGGTGTTTCGTTGATGACCCTGCCAGCACCTTAT-GAGAAATC-   [1065]
Carteria_rad      ATTGGCAGGCGTTTTGTTAACGACCCTGC-AGCACCTTAT--AGAAATC-   [1065]
Gonium_pecto      ATTGGCAGATGTTCCTTTGATGACTCTGCCAGCACCTTAT-GAGAAATCA   [1061]
Chlorella_kess    ATCGGCGGATGTTTCTTCGATGACTCCGCCGGCACCTTAT-GAGAAATCA   [1068]
Chlorella_vulg    ATCGGCGGATGTTTCTTCGATGACTCCGCCGGCACCTTAT-GAGAAATCA   [1070]
Protothec_wic     ATCGGCGGACGTTCTATCGATGACTCCGCCGGCACCTTAT-GAGAAATCA   [1065]
Chlorella_prot    ATCGGTGGTCGTTCATTCAATGACACCACCGGCACCTCAT-GAGAAATCA   [1071]
Chlorella_min     ATCGGCGGGTGTTCTTTTGATGACCCCGCCGGCACCTTAT-GAGAAATCA   [1068]
Neochloris_aqu    ATTGGCGGACGTTTCATTGATGACTCCGCCAGCACCTTAT-GAGAAATCA   [1065]
Neochloris_vig    ATTTGCGGACGTTTCATTGATGACTCCGCCAGCACCTTGT-GAGAAATCA   [1063]
Pediastrum_dup    ATTGGCGGATGTTTTTTTGATGACTCCGCCAGCACCTTAT-GAGAAATCA   [1066]
Scenedesm_obl     ATTGGCGAATGTTTTTTTAATGACTTCGCCAGCACCTTAT-GAGAAATCA   [1065]
Characium_hin     ATTGGCGAACGTTTCATTGATGACTTCGCCAGAACCTTAT-GAGAAATCA   [1063]
Chlorella_fus     ATTGGCGAATGTTTTTTTAATGACTTCGCCAGCACCTTAT-GAGAAATCA   [1066]
Ankistrodesmus    ATTGGAGGATGTTCTTTTGATGACTTCTCCAGCACCTTAT-GAGAAATCA   [1064]
Pseudotreb_gig    ATTGGCGGGTGTTCTTTCGATGACCCCGCCAGCACCTTAT-GAGAAATC-   [1051]
Pleurastr_terr    ATTGTGCCGATGTTTATTCAATTACTCCGCCACACCTYAT-GA-AAATC-   [1055]
Characium_per     ATTGGCGGACGTTCATTCGATGACTCCGCCAGCACCTTAT-GAGAAATCA   [1067]
Parietochl_pse    ATTGGCGGATGTTTTATCGATGACTCCGCCAGCACCTTAT-GAGAAATCA   [1067]
Friedmannia_is    ATTGGCGGGTGTTCTATCGATGACCCCGCCAGCACCTTAT-GAGAAATCA   [1068]

[                          1110      1120      1130      1140      1150]
[                          .         .         .         .         .]

Glycine_max       AAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1119]
Oryza_sativa      AAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1124]
Zamia_pumila      AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1123]
Psilotum_n        AAGTCTTTGGGTTCCGGGGGGA????????????????????????????   [1124]
Equisetum_ar      AAGTCTTTGGGTTCC----GGA-T??????????????????????????   [1116]
Atrichum_angus    AAGTATTTGGGTTCCGGGGGGAGTATG???????????????????????   [1105]
Notothylas_bre    AAGTTTTTGGGTTCCGG?????????????????????????????????   [1095]
Phaeoceros_lae    AAGTTTTTGGGTTCCGGGGGGAGTAT????????????????????????   [1104]
Porella_pi        AAGTTTTTGGGTTCC???????????????????????????????????   [1123]
Conocephal_con    AA-TTTTTGGGTTCC???????????????????????????????????   [1104]
Asterella_tene    AAGTTTTTGGGTTCCGGGGGGAG-ATG???????????????????????   [1107]
Riccia            AAGTTTTTGGGTTCCGGGGGGAGTAT????????????????????????   [1117]
Klebsormid_fla    -AGTTTTTGGGTTCCGGGGGGA-TATGGTC????????????????????   [1121]
Coleochaet_nit    AAGTTCTTGGGTTCC???????????????????????????????????   [1107]
Fissidens_taxi    AAGTTTTTGGGTTCCGGGGGGAGTATG???????????????????????   [1099]
Plagiomnium_cu    -AGTTTTTGGGTTCCGGGGGGAGTATG???????????????????????   [1092]
Micromonas_pus    AA-TTTTTGGGTTCCGGGA???????????????????????????????   [1112]
Mantoniel_squa    AA-TTTTT??????????????????????????????????????????   [1081]
Nephroselm_pyr    AAGTTTTTGGGTTCC???????????????????????????????????   [1105]
Pedinomonas_mi    AAGTCTTT??????????????????????????????????????????   [1091]
Tetraselm_cart    AAGTTTTTGGGTT?????????????????????????????????????   [1107]
Enteromorpha      AAGTCTTTGGGTTCCGGGGGGAG?ATGG??????????????????????   [1117]
Ulva_fasci        AAGTTTTTGGGTTCCGGGGGGA?TATGGTC?CAA????????????????   [1105]
Ulothrix_zo       AAGTYTTTGGGYTCCGGGGAG??TATGGTC????????????????????   [1070]
Cympolia_barba    TAAATCTACAGGCTTGGGGGGGAA??????????????????????????   [1127]
Batophora_oers    TAAATTTGGGCTCCGGG???TAGTATGGT?????????????????????   [1106]
Codium_decort     AGATCTTGGGCTTCCGGGGAGC?TAGTGCTCAGTGTGGTG??????????   [1114]
Cladophoro        AAATTTATG?CTTC?GGGGGGAGTAT????????????????????????   [1108]
Blastophysa_rh    AAGTCTTTGGGTTC????????????????????????????????????   [1104]
Trentepohlia      AAGTT--TGGGTTCC???????????????????????????????????   [1108]
Cephaleuro_par    AAGTTGTTGGGTTCC?GGGGGAGTATGG??????????????????????   [1092]
Characium_vac     AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1113]
Dunaliella_par    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1112]
Chlamyd_reinha    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1114]
Volvox_carteri    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1114]
Chlorococc_min    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1112]
Draparn_plum      AAGTCTTTGGGTTCCGGGGGGA????????????????????????????   [1104]
Uronema_belk      -A-TCTTTGGGTTCCGGGGGGA-TAT????????????????????????   [1070]
Chlamydom_moew    GAGTCTTTGGGTTCCGGGGGGAGTATGG??????????????????????   [1107]
Stephanos_pl      -AGTTTTTGGGTTCC?GGGGGA????????????????????????????   [1114]
Carteria_rad      -A-TTTTTGGGTTCCGGGGGGA????????????????????????????   [1113]
Gonium_pecto      AA-TTTTTGG-TTCCGGGGGGAGGA?????????????????????????   [1109]
Chlorella_kess    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1118]
Chlorella_vulg    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1120]
Protothec_wic     AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1115]
Chlorella_prot    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1121]
Chlorella_min     AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1118]
Neochloris_aqu    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1115]
Neochloris_vig    AAGTTTTTGGGT--CGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1111]
Pediastrum_dup    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1116]
Scenedesm_obl     AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1115]
Characium_hin     AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1113]
Chlorella_fus     AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1116]
Ankistrodesmus    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1114]
Pseudotreb_gig    -AGTTTTTGGGTTCCGGGGGGAGTATGG??????????????????????   [1100]
Pleurastr_terr    AAGWWTTT---TTCC??GGGGAGTATG???????????????????????   [1102]
Characium_per     AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1117]
Parietochl_pse    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1117]
Friedmannia_is    AAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG   [1118]

[                          1160      1170      1180      1190      1200]
[                          .         .         .         .         .]

Glycine_max       AATTGACGGAA-GGGCA-CCACCAGGAGTGGAGCCTGCGGCT-AATTTGA   [1166]
Oryza_sativa      AATTGACGGAA-GGGCA-CCACCAGGCGTGGGGCCTGCGGCTTAATTTGA   [1172]
Zamia_pumila      AATTGACGGAA-GGGCA-CCACCAGGAGTGGAGCCTGCGGCTTAATTTGA   [1171]
Psilotum_n        ??????????????????????????????????????????????????   [1174]
Equisetum_ar      ??????????????????????????????????????????????????   [1166]
Atrichum_angus    ??????????????????????????????????????????????????   [1155]
Notothylas_bre    ??????????????????????????????????????????????????   [1145]
Phaeoceros_lae    ??????????????????????????????????????????????????   [1154]
Porella_pi        ??????????????????????????????????????????????????   [1173]
Conocephal_con    ??????????????????????????????????????????????????   [1154]
Asterella_tene    ??????????????????????????????????????????????????   [1157]
Riccia            ??????????????????????????????????????????????????   [1167]
Klebsormid_fla    ??????????????????????????????????????????????????   [1171]
Coleochaet_nit    ??????????????????????????????????????????????????   [1157]
Fissidens_taxi    ??????????????????????????????????????????????????   [1149]
Plagiomnium_cu    ??????????????????????????????????????????????????   [1142]
Micromonas_pus    ??????????????????????????????????????????????????   [1162]
Mantoniel_squa    ??????????????????????????????????????????????????   [1131]
Nephroselm_pyr    ??????????????????????????????????????????????????   [1155]
Pedinomonas_mi    ??????????????????????????????????????????????????   [1141]
Tetraselm_cart    ??????????????????????????????????????????????????   [1157]
Enteromorpha      ??????????????????????????????????????????????????   [1167]
Ulva_fasci        ??????????????????????????????????????????????????   [1155]
Ulothrix_zo       ??????????????????????????????????????????????????   [1120]
Cympolia_barba    ??????????????????????????????????????????????????   [1177]
Batophora_oers    ??????????????????????????????????????????????????   [1156]
Codium_decort     ??????????????????????????????????????????????????   [1164]
Cladophoro        ??????????????????????????????????????????????????   [1158]
Blastophysa_rh    ??????????????????????????????????????????????????   [1154]
Trentepohlia      ??????????????????????????????????????????????????   [1158]
Cephaleuro_par    ??????????????????????????????????????????????????   [1142]
Characium_vac     AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1161]
Dunaliella_par    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1160]
Chlamyd_reinha    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1162]
Volvox_carteri    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1162]
Chlorococc_min    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1160]
Draparn_plum      ??????????????????????????????????????????????????   [1154]
Uronema_belk      ??????????????????????????????????????????????????   [1120]
Chlamydom_moew    ??????????????????????????????????????????????????   [1157]
Stephanos_pl      ??????????????????????????????????????????????????   [1164]
Carteria_rad      ??????????????????????????????????????????????????   [1163]
Gonium_pecto      ??????????????????????????????????????????????????   [1159]
Chlorella_kess    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1166]
Chlorella_vulg    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1168]
Protothec_wic     AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1163]
Chlorella_prot    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1169]
Chlorella_min     AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1166]
Neochloris_aqu    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1163]
Neochloris_vig    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1159]
Pediastrum_dup    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1164]
Scenedesm_obl     AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1163]
Characium_hin     AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1161]
Chlorella_fus     AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1164]
Ankistrodesmus    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1162]
Pseudotreb_gig    ??????????????????????????????????????????????????   [1150]
Pleurastr_terr    ??????????????????????????????????????????????????   [1152]
Characium_per     AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1165]
Parietochl_pse    AATTGACGGAAAGGGCAGCCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1167]
Friedmannia_is    AATTGACGGAA-GGGCA-CCACCAGGCGTGGAGCCTGCGGCTTAATTTGA   [1166]

[                          1210      1220      1230      1240      1250]
[                          .         .         .         .         .]

Glycine_max       CTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGG-TTGACAGAC   [1215]
Oryza_sativa      CTCAACACGGGGAAACTTACCAGGTCCAGACATAGCAAGGATTGACAGAC   [1222]
Zamia_pumila      CTCAACACGGGGAAACTTACCAGGTCCAGACATAGCAAGGATTGACAGAT   [1221]
Psilotum_n        ??????????????????????????????????????GGATTGACAGAT   [1224]
Equisetum_ar      ??????????????????????????????????????????TGACAGAT   [1216]
Atrichum_angus    ??????????????????????????????????????????????????   [1205]
Notothylas_bre    ??????????????????????????????????????????????????   [1195]
Phaeoceros_lae    ??????????????????????????????????????????????????   [1204]
Porella_pi        ??????????????????????????????????????????????????   [1223]
Conocephal_con    ??????????????????????????????????????????????????   [1204]
Asterella_tene    ??????????????????????????????????????????????????   [1207]
Riccia            ????????????????????????????????????????????????AT   [1217]
Klebsormid_fla    ??????????????????????????????????????????????????   [1221]
Coleochaet_nit    ??????????????????????????????????????????????????   [1207]
Fissidens_taxi    ??????????????????????????????????????????????????   [1199]
Plagiomnium_cu    ??????????????????????????????????????????????????   [1192]
Micromonas_pus    ??????????????????????????????????????????????????   [1212]
Mantoniel_squa    ??????????????????????????????????????????????????   [1181]
Nephroselm_pyr    ??????????????????????????????????????????????????   [1205]
Pedinomonas_mi    ??????????????????????????????????????????????????   [1191]
Tetraselm_cart    ??????????????????????????????????????????????????   [1207]
Enteromorpha      ????????????AAACTTACCAGGTCCAGACATGGA---GATTGACAGAT   [1214]
Ulva_fasci        ??????????????????????????????????????????????????   [1205]
Ulothrix_zo       ??????????????????????????????????????????????????   [1170]
Cympolia_barba    ????????????????????????????????????????????????TT   [1227]
Batophora_oers    ??????????????????????????????????????????????????   [1206]
Codium_decort     ??????????????????????????????????????????????????   [1214]
Cladophoro        ??????????????????????????????????????????????AGAT   [1208]
Blastophysa_rh    ??????????????????????????????????????????????????   [1204]
Trentepohlia      ??????????????????????????????????????????????????   [1208]
Cephaleuro_par    ????????????AAACTTACCAGGTCCAGACATGGT-AG-AT-GACAGAT   [1189]
Characium_vac     CTCAACACGGGGAAACTTACCAGGTCCAGACACGGGGAGGATTGACAGAT   [1211]
Dunaliella_par    CTCAACACGGGAAAACTTACCAGGTCCAGACACGGGGAGGATTGACAGAT   [1210]
Chlamyd_reinha    CTCAACACGGGGAAACTTACCAGGTCCAGACACGGGAAGGATTGACAGAT   [1212]
Volvox_carteri    CTCAACACGGGGAAACTTACCAGGTCCAGACACGGGAAGGATTGACAGAT   [1212]
Chlorococc_min    CTCAACACGGGGAAACTTACCAGGTCCAGACACGGGGAGGATTGACAGAT   [1210]
Draparn_plum      ??????????????????????????????????????????????????   [1204]
Uronema_belk      ??????????????????????????????????????????????????   [1170]
Chlamydom_moew    ??????????????????????????????????????????????AGAT   [1207]
Stephanos_pl      ??????????????????????????????????????????????????   [1214]
Carteria_rad      ????????????????????????????????????????????ACAGAT   [1213]
Gonium_pecto      ??????????????????????????????????????????TGACAGAT   [1209]
Chlorella_kess    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1216]
Chlorella_vulg    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1218]
Protothec_wic     CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1213]
Chlorella_prot    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1219]
Chlorella_min     CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1216]
Neochloris_aqu    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1213]
Neochloris_vig    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1209]
Pediastrum_dup    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1214]
Scenedesm_obl     CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1213]
Characium_hin     CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1211]
Chlorella_fus     CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1214]
Ankistrodesmus    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1212]
Pseudotreb_gig    ??????????????????????????????????????????????????   [1200]
Pleurastr_terr    ??????????????????????????????????????????????????   [1202]
Characium_per     CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1215]
Parietochl_pse    CTCAACACGGGAAAACTTACCAGGTCCAGACATGTGAAGGATTGACAGAT   [1217]
Friedmannia_is    CTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGAT   [1216]

[                          1260      1270      1280      1290      1300]
[                          .         .         .         .         .]

Glycine_max       TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCCTTCTTAGT   [1265]
Oryza_sativa      TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1272]
Zamia_pumila      TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1271]
Psilotum_n        TGAGAGCTCTTTCTTGGTTCTATGGGTGGT---G-ATGGCCGTT---AGT   [1267]
Equisetum_ar      TGAGAGCTCTTTCTTGATTCTATGGGTGGTAGTGCATGGCCGTTCTTAGT   [1266]
Atrichum_angus    ??????CTCTTTCTTGATTCTATGGGTGGT-GTGCATGGCCGTT-TT-GT   [1252]
Notothylas_bre    ??????????????????????????????????CA-GGCCGTT-TTAGT   [1243]
Phaeoceros_lae    ?????????????????????????????T--TGCATGGCCGTT-TTAGT   [1251]
Porella_pi        ???????????????????????????????????????CC-----TAGT   [1268]
Conocephal_con    ??????CTCTTTCTT-ATTCTATGGGT--T--TGCAT---CGTTCTTAGT   [1246]
Asterella_tene    ??????????????????????????????????????????????????   [1257]
Riccia            TGAGAGCTCTTTCTTGATTCTATGGGT--T--TGCATGGCCG-TCTTAGT   [1262]
Klebsormid_fla    ??????????????????????????????????????????????????   [1271]
Coleochaet_nit    ???????????????????????????????????AT--CCAGTTTTCGT   [1255]
Fissidens_taxi    ??????CTCTTTCTTGATTCTATGGGTG-T-GTGCATGGCCGTT-TTAGT   [1246]
Plagiomnium_cu    ??AGAGCTCTTTCTTGGTTCTATGGGTGGT-GTGCATGGCCGTT-TTAGT   [1240]
Micromonas_pus    ?????????????????????????????T-GTGCATGGCCGTTCTT-GT   [1260]
Mantoniel_squa    ?????????????????????????????T-G-GCWTGGCCGTT-TT-GT   [1227]
Nephroselm_pyr    ??????????????????????????????????CATGGCCGTTCTTAGT   [1255]
Pedinomonas_mi    ?????????????????????????????????GCATGGCCGTTCTTAGT   [1241]
Tetraselm_cart    ????????????????????TATGGGTG-T-GTGCATGGCCGTTCTTAGT   [1255]
Enteromorpha      TGAGAGCTCTTTCTTGGTTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1264]
Ulva_fasci        ???????????????????CTATGGGT-GTGGTGCATG-CCGTTCTTAGT   [1253]
Ulothrix_zo       ?????????????????????ATGG-TAGTTG---ATGGCCGTTCT--GT   [1214]
Cympolia_barba    TGAT-GC--TTTCTTGATTCT-TGGGTGGTGGTGCATGGCC-TTTTT-GT   [1271]
Batophora_oers    ?????????TTTCTTGATT--A-GGGT--------ATGGCCATTCTTAGT   [1245]
Codium_decort     ??????CTCTTTCTTGATTCC-TGA-TGGTG-TGCATGGCCGATCTCAGC   [1261]
Cladophoro        TGATAGCTCTTT-AAGATTTTTTGGATGGTG--GCATGGCCGTTCTTAGT   [1255]
Blastophysa_rh    ??????????????????????????????T-TGCATGGCCGTTCTTAGT   [1253]
Trentepohlia      ??????????????????????????????TGTGCATGGCCGTTCTT-GT   [1257]
Cephaleuro_par    TGATAGCTCTTTCTTGGTTCTATGGGTGTGGGGGCATGGCCGTTCTTAGT   [1239]
Characium_vac     TGAGAGCTCTTTCTTGATTCTGTGGGTGGTGGTGCATGGCCGTTCTTAGT   [1261]
Dunaliella_par    TGAGAGCTCTTTCTTGATTCTGTGGGTGGTGGTGCATGGC?GTTCTTAGT   [1260]
Chlamyd_reinha    TGAGAGCTCTTTCTTGATTCTGTGGGTGGTGGTGCATGGCCGTTCTTAGT   [1262]
Volvox_carteri    TGAGAGCTCTTTCTTGATTCTGTGGGTGGTGGTGCATGGCCGTTCTTAGT   [1262]
Chlorococc_min    TGAGAGCTCTTTCTTGATTCTGTGGGTGGTGGTGCATGGCCGTTCTTAGT   [1260]
Draparn_plum      ????????????????????????????????????TGGCCGTTCTTAGT   [1254]
Uronema_belk      ?????????????????TTCTATGG-TGGTG?TG?ATGGCCGTTCTTAGT   [1219]
Chlamydom_moew    T?AGAGCTCTTT?TTGATTCT-TGGGTGGTGGTGCATGGCCGTTCTTAGT   [1256]
Stephanos_pl      ??????CTCTTTCTTGATTCT-TGGGTGGT-GTGC-TGGCCGTTCTTAGT   [1261]
Carteria_rad      TGAGAGCTCTTTCTTGATTCT-TGGGTGGT--TGCATGGCCGTTCTTAGT   [1260]
Gonium_pecto      TGAGAGCTCTTTCTTGATTCTGTGGGTG-T--TGCATGGCCGTTCTTAGT   [1256]
Chlorella_kess    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1266]
Chlorella_vulg    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1268]
Protothec_wic     TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1263]
Chlorella_prot    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1269]
Chlorella_min     TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1266]
Neochloris_aqu    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1263]
Neochloris_vig    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1259]
Pediastrum_dup    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATAGGCGTTCTTAGT   [1264]
Scenedesm_obl     TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1263]
Characium_hin     TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1261]
Chlorella_fus     TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1264]
Ankistrodesmus    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1262]
Pseudotreb_gig    ??????????????????????????????????????GCCGTTCTTAGT   [1250]
Pleurastr_terr    ?????????????????????????????TGGTGCATGGCCGTTCTTAGT   [1252]
Characium_per     TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1265]
Parietochl_pse    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1267]
Friedmannia_is    TGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGT   [1266]

[                          1310      1320      1330      1340      1350]
[                          .         .         .         .         .]

Glycine_max       TGGTGGAGCGATTTGTCTGGTT-AATTCCGTTAACCAACGAGACCTCAGC   [1314]
Oryza_sativa      TGGTGGAGCGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1321]
Zamia_pumila      TGGTGGAGCGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCGGC   [1320]
Psilotum_n        TGGTGGAG-G-TTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1314]
Equisetum_ar      TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1315]
Atrichum_angus    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAAC-AACGAGACCTCAGC   [1300]
Notothylas_bre    TGGTGGAGTGA-TTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1291]
Phaeoceros_lae    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1300]
Porella_pi        TGGTGGAG-G--TTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1314]
Conocephal_con    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1295]
Asterella_tene    TGGTGG-GTGATTTGTCTGGTT-AATTCCGTTAACGAAGGAGACCTCAGC   [1305]
Riccia            TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1311]
Klebsormid_fla    ????????????????????????????????AACGAACGAGACCTCAGC   [1321]
Coleochaet_nit    TCW-GGAGTGATTTGTCTG-TT-AATTC?G?TAACGAAGGAG?CCTCAGC   [1302]
Fissidens_taxi    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1295]
Plagiomnium_cu    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1289]
Micromonas_pus    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1309]
Mantoniel_squa    TGGTGGAGTGATT--TCTGGTT-AATTCCGTTAAC-AAC-AGACCTCWGC   [1272]
Nephroselm_pyr    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCAGC   [1304]
Pedinomonas_mi    TGGTGGAGTGATTTGTCTGGTT-AATTCCGTTAACGAACGAGACCTCGAC   [1290]
Tetraselm_cart    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1304]
Enteromorpha      TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAA-GAGACCTCAGC   [1312]
Ulva_fasci        TGGTGGGTTGCCTTGTCAGGTT-GATTC-GGTAACGAACGAGACCTCAGC   [1301]
Ulothrix_zo       TGATGGGTCTGGCCTTC---TT-GATTCCGGTAA----CGA-ACY-YA-C   [1253]
Cympolia_barba    TCGTGGGTTGCCCTGTCTGGTT-GACTCCGTTAACGAACGAGATCTCAAC   [1320]
Batophora_oers    TC-TGGGTTATCTTGTCTGGTT-GACTCCGTTAACCA---A-ACCTCAGC   [1289]
Codium_decort     CG-TGGGTTGACCT-TCAGGTT-C-CTCCGGTAAY-Y-C-AGACCTCGAC   [1304]
Cladophoro        TCGTGGATTGATTTGTCAGGTT-G-TTCCGG--ACGGA-G-GACCC--GC   [1297]
Blastophysa_rh    TGGTGGGTTGGCTTGTCAGGTT-GATTCCGGT-ACGAACGAGACCTCCGC   [1301]
Trentepohlia      TGGT-GGTTGGCTTGT---GTT-GATTCCGGTAACGAACGAGACCTCAGC   [1302]
Cephaleuro_par    TGGTGGGTTGGCTTGTCGGGTT-GATTCCGGGAACGAACGAGACCTCAGC   [1288]
Characium_vac     TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1310]
Dunaliella_par    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1309]
Chlamyd_reinha    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1311]
Volvox_carteri    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1311]
Chlorococc_min    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1309]
Draparn_plum      TGGTGGGTTGCCTTGTCAGGTT-GATTC-GG-AACGAACG-GACCTCAGC   [1300]
Uronema_belk      TGGTGGGTTGCCTTGTCAGGTT-GATTC?GGTAACGAACGAGACC-CAGC   [1267]
Chlamydom_moew    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1305]
Stephanos_pl      TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1310]
Carteria_rad      TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1309]
Gonium_pecto      TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1305]
Chlorella_kess    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1315]
Chlorella_vulg    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1317]
Protothec_wic     TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1312]
Chlorella_prot    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1318]
Chlorella_min     TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1315]
Neochloris_aqu    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1312]
Neochloris_vig    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1308]
Pediastrum_dup    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1313]
Scenedesm_obl     TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1312]
Characium_hin     TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1310]
Chlorella_fus     TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1313]
Ankistrodesmus    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1311]
Pseudotreb_gig    TGGTGGG-TGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1298]
Pleurastr_terr    TGGT?GGTTGCCTTGTCAGGTT-GATTCCGGTAACGAAGGAGACCTCAGC   [1301]
Characium_per     TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1314]
Parietochl_pse    TGGTGGGTTGCCTTGTCAGGTTCGATTCCGGTAACGAACGAGACCTCAGC   [1317]
Friedmannia_is    TGGTGGGTTGCCTTGTCAGGTT-GATTCCGGTAACGAACGAGACCTCAGC   [1315]

[                          1360      1370      1380      1390      1400]
[                          .         .         .         .         .]

Glycine_max       CTGCTAAATAGCTAT--------------------------AGCTTCTTA   [1338]
Oryza_sativa      CTGCTAACTAGCTATGCGGAGCCATCCCTCCGCAGCT----AGCTTCTTA   [1367]
Zamia_pumila      CTGCTAACTAGCTACGCGGAGGGTTTCTTTCGTGGCC----AGCTTCTTA   [1366]
Psilotum_n        CTGCTAACTAGTTACGCGAAGGATCCTCTTCGTGGCC----AACTT-TTA   [1359]
Equisetum_ar      CTGCTAACTAGTTACGCGAAGACTTGTCTTCGTGGCC----AACTTCTTA   [1361]
Atrichum_angus    CTGCTAACTAGTTACACGAAGAATC-TCTTTGTGGCC----AACTT-TTA   [1344]
Notothylas_bre    CTGCTAACTAGTTACAC-AAGAACCTTCTTCGTGGCC----AACTTCTTA   [1336]
Phaeoceros_lae    CTGCTAACTAGTTACACGAAGAACCTTCTTCGTGGCC----AACTTCTTA   [1346]
Porella_pi        CTGCTAACTAGTTACACGAAGAATCTTCTTTGTGGCC----AACTT-TTA   [1359]
Conocephal_con    CTGCTAACTA-CTACGCGAGTCCATTTTTTGTCCTGCGC--AGCTT-TTA   [1341]
Asterella_tene    CTGCTAACTA-CTACGCGGGGGTWCTCCCCTGCGGCC----AGCTT-TTA   [1349]
Riccia            CTGCTAACTAGCTACGCGGGGGTTCTCCCTGCGGCC-----AGCTT---A   [1353]
Klebsormid_fla    CTGCTAACTAGTTACACGGAGATTCTTCTCCGTGGCC----AACTTCTTA   [1367]
Coleochaet_nit    CTGCTAACTAGGCTAACGTTTTGTTGGGAC------------ACTTGTTA   [1340]
Fissidens_taxi    CTGCTAACTAGTTACGCGAAGGATTTCTCTCCTTGGCGGCCAACTTCTTA   [1345]
Plagiomnium_cu    CTGCTAACTAGTTACGCGAAGGATTTCCTCCTTTGCGGCC-AACTTC--A   [1336]
Micromonas_pus    CTGCTAAATAGTCATACGCTACTCT-TAGCGCAGT------GACTTCTTA   [1352]
Mantoniel_squa    CTGCTAAATAGTCATACGCTACTCT-TAGCGCAGT------GACTTCTTA   [1315]
Nephroselm_pyr    CTGCTAAATAGTCACGCGATGCTCCTGCATGGCGGCG----GACTT-TTA   [1349]
Pedinomonas_mi    CTGCTAAATAGGTTCAGTATCGATGCGTCGATGCTTG----GAGCTTTTA   [1336]
Tetraselm_cart    CTGCTAAATAGTTACTCCTACTTTGGTAGGAGGTG------AACTT-TTA   [1347]
Enteromorpha      CTGCTAAATAGTGACGATTGCTCGGCAGTCGCG--------CGCTT-TTA   [1353]
Ulva_fasci        CTGCTAAATAGTGACGTCTGCTTCGGCAGTCGCG-------CGCTTGTTA   [1344]
Ulothrix_zo       C-GCTAAA-AGTTCCYTYGGCAGTTGGCA------------CACTT-TTA   [1288]
Cympolia_barba    CTACTAAATAGTATTACATCATTGTAGAAATATAT------ACCTTCTTA   [1364]
Batophora_oers    CT-CTAAA-A-CGGCCTCTCCTTAGGAGTGC----------CCCYTCYTA   [1326]
Codium_decort     CTGCCAAATAGCACCGGCCCTTCCGATGGC-----------ACCTTCTTG   [1343]
Cladophoro        CTACTAACTAGCTCTACCTGAACTTCAGGTAGCC-------AGCTT-TTA   [1339]
Blastophysa_rh    CTGCTAAATAGCCACTCCGGGGGCCC---------------GGCTTCTTA   [1336]
Trentepohlia      CTGCTAAATAGTA-CTTTCGGTT---CCCA-GC--------AACTTCTTA   [1339]
Cephaleuro_par    CTGCTAAATAGTTGCCCCCGCCTCGGTGGGGGTCGA-----GACTTGTTA   [1333]
Characium_vac     CTGCTAAATAGTAAC--------------------------TACTTCTTA   [1334]
Dunaliella_par    CTACTAAATAGTCAC--------------------------GACTTCTTA   [1333]
Chlamyd_reinha    CTGCTAAATAGTCAG--------------------------GACTTCTTA   [1335]
Volvox_carteri    CTGCTAAATAGTCAGCATGACTGCGGTGCGCA---------GACTTCTTA   [1352]
Chlorococc_min    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1333]
Draparn_plum      CTGCTAAATAGTCACCTTCTCGCGGCAGGC-----------CACTTC--A   [1337]
Uronema_belk      CTGCTAAATAGTCACC-----GCGGCAGGA-----------GACTT-TTA   [1300]
Chlamydom_moew    CTGCTAAATAGTCGGCGGTCCTTTCTGGATCGCCTC-----GACTTCTTA   [1350]
Stephanos_pl      CTGCTAAATAGTCACGGGACCTTGGTACACGCTT-------GACTT-TTA   [1352]
Carteria_rad      CTGCTAAATAGTCACGATTGCTTTTTGGCAGTCGGCA----GACTTCTTA   [1355]
Gonium_pecto      CTGCTAAATAGTCAGCATCCTGCGGTGCGCA----------GACTT-TTA   [1344]
Chlorella_kess    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1339]
Chlorella_vulg    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1341]
Protothec_wic     CTGCTAAATAGTGCT--------------------------TACTTCTTA   [1336]
Chlorella_prot    CTGCTAAATAGTTTT--------------------------AACTTCTTA   [1342]
Chlorella_min     CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1339]
Neochloris_aqu    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1336]
Neochloris_vig    CTGCTAAATAGT???--------------------------GACTTCTTA   [1332]
Pediastrum_dup    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1337]
Scenedesm_obl     CTGCTAAATAGTCTC--------------------------GACTTCTTA   [1336]
Characium_hin     CTGCTAAATAGTCCG--------------------------GACTTCTTA   [1334]
Chlorella_fus     CTGCTAAATAGTCCT--------------------------GACTTCTTA   [1337]
Ankistrodesmus    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1335]
Pseudotreb_gig    CTGCTAAATAGTCACGGCTGCTTTYCAGTCGGCA-------GACTT-TTA   [1340]
Pleurastr_terr    CTGCTAAATAGTC-CTAATCTTCTCGCGGTTAGCT------GACTT?TTA   [1344]
Characium_per     CTGCTAAATAGTC-C--------------------------GACTTCTTA   [1337]
Parietochl_pse    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1341]
Friedmannia_is    CTGCTAAATAGTCAC--------------------------GACTTCTTA   [1339]

[                          1410      1420      1430      1440      1450]
[                          .         .         .         .         .]

Glycine_max       GAGGGACTATGGCCGCTTAGGCCAC----GGAAGTTTGAGGCAATAACAG   [1384]
Oryza_sativa      GAGGGACTATGGCCGTTTAGGCCAC----GGAAGTTTGAGGCAATAACAG   [1413]
Zamia_pumila      GAGGGACTATGGCCGTTTAGGCCAT----GGAAGTTTGAGGCAATAACAG   [1412]
Psilotum_n        GAGGGACTATGGCCGCCTAGGCCAT----GGA??????????????????   [1405]
Equisetum_ar      GAGGGACTATGGCCGTCTAGGCCAT----GGA??????????????????   [1407]
Atrichum_angus    GAGGGACTATTGGCGTCT-GCCAAT----GGAA?????????????????   [1389]
Notothylas_bre    GAGGGACTATTTGCGTCTA-CGAAT----GGAA?????????????????   [1381]
Phaeoceros_lae    GAGGGACTATTTGCGTCTAGCGAAT----GGAA?????????????????   [1392]
Porella_pi        GAGGGACTATT--CGTCTAGCCAAT----GGA??????????????????   [1403]
Conocephal_con    GAGGGACT---GG--TC--GCC-AC----GGAA?????????????????   [1379]
Asterella_tene    GAGGGACTGTCGGCGTCTAGCCGA-----GGA??????????????????   [1394]
Riccia            GAGGGACT--CGG--TCTAGCCGAC----GGAA?????????????????   [1395]
Klebsormid_fla    GAGGGACTATTTGGCGTCTACAGCCAAT-GGAA?TTTGA???????????   [1416]
Coleochaet_nit    GAGGGACTGTGAGGCGCTTAGCTCAT---GGA??????????????????   [1387]
Fissidens_taxi    GAGGGACTATCGGCGTCT-AGCCGAT---GGAA?TTT?A???????????   [1391]
Plagiomnium_cu    GAGGGACTATCGGCGTC---GCCGAT---GGAAG?TTGA???????????   [1380]
Micromonas_pus    GAGGGACTATGTGCGTTT-GCACAT----GGAA-TT??????????????   [1396]
Mantoniel_squa    GAGGGACTATGTGCGTTTWGCACAT----GGAA-TTTGA???????????   [1360]
Nephroselm_pyr    GAGGGACTATCGGTATT-A-CCGAT----GGA??????????????????   [1393]
Pedinomonas_mi    GAGGGACT-TCGGATCC-A-CCGGT----GGAAGT???????????????   [1379]
Tetraselm_cart    GAGGGACTATTGGCGTTT-GCCAAT----GGAAGTTA?????????????   [1392]
Enteromorpha      GAGGGACTGTTGGCG-TCTAGCCAAT---GGAAGTAT?????????????   [1399]
Ulva_fasci        GAGGGACTGTTGGCG-TCTAGCCAATT--GGAAGTATGA???????????   [1391]
Ulothrix_zo       GAGGGACT-TTGGCG-TCT-GCCAAT---GGAAGTAT-A???????????   [1331]
Cympolia_barba    GGGGAACTATC-AGTT-CAAACCGAT---GGAAG????????????????   [1409]
Batophora_oers    -A-GGAC--TCGGCG--CAA??????????????????????????????   [1370]
Codium_decort     GAGGGACTGGCGCGAGAGCCGGACGCG???????????????????????   [1393]
Cladophoro        GAGGGACTCTCGGAA-TGAAACCAA----GGAA?????????????????   [1384]
Blastophysa_rh    GAGGGACTATGGCTCGAATAGGCCAT---GGAA?????????????????   [1383]
Trentepohlia      -A---ACTATTACATCA?????????????????????????????????   [1385]
Cephaleuro_par    GAGGGACTATTAGCG-ATTTTCA--CTAATT--AA-T?????????????   [1377]
Characium_vac     GAGGGACTATTGGCG-TTTAGTCAAT---GGAAGTGTGAGGCAATAACAG   [1380]
Dunaliella_par    GAGGGACTATTGGCG-TTTAGCCAAT---GGAAGTGTGAGGCAATAACAG   [1379]
Chlamyd_reinha    GAGGGACTATTGGCG-TTTAGCCAAT---GGAAGTATGAGGCGATAACAG   [1381]
Volvox_carteri    GAGGGACTATTGGCG-TTCAGCCAAT---GGAAGTATGAGGCGATAACAG   [1398]
Chlorococc_min    GAGGGACTATTGGCG-TTTAGCCAGT---GGAAGTGTGAGGCAATAACAG   [1379]
Draparn_plum      GAGGGACTATTGCCG-TTTAGGC???????????????????????????   [1386]
Uronema_belk      GAGGGACTATTGTC---TTAGGCAAT---GAAGTA???????????????   [1344]
Chlamydom_moew    GAGGGACTATTGACGTT-TAGTCAAT---GGAAG????????????????   [1396]
Stephanos_pl      GAGGGACTATTGGCGTTACAGTCAAT---GGA??????????????????   [1399]
Carteria_rad      GAGGGACTATTGTCG-TTTAGGCAG?????????????????????????   [1404]
Gonium_pecto      GAGGGACTATTGGCG-TTCAGCCAAT---GGA??????????????????   [1390]
Chlorella_kess    GAGGGACTATTGGCG-A-TAGCCAAT---GGAAGCATGAGGCAATAACAG   [1384]
Chlorella_vulg    GAGGGACTATTGGCG-A-TAGCCAAT---GGAAGCATGAGGCAATAACAG   [1386]
Protothec_wic     GAGGGACTATTGGCG-A-TAGCCAAT---GGAAGCTTGAGGCAATAACAG   [1381]
Chlorella_prot    GAGGGACTCTCGGCG-A-TAGCCGAG---GGAAGCTTGAGGCAATAACAG   [1387]
Chlorella_min     GAGGGACTATTGGCG-A-TAGCCAGT---GGAAGCATGAGGCAATAACAG   [1384]
Neochloris_aqu    GAGGGACTATTGGCG-TTTAGTCAAT---GGAAGTATGAGGCAATAACAG   [1382]
Neochloris_vig    GAGGGACTATTGGCG--TTAGTCAATT--GGAAGTATGAGGCAATAACAG   [1378]
Pediastrum_dup    GAGGGACTATTGGCG-TTTAGTCAAT---GGAAGTATGAGGCAATAACAG   [1383]
Scenedesm_obl     GAGGGACTATTGGCG--TTAGTCAAT---GGAAGTATGAGGCAATAACAG   [1381]
Characium_hin     GAGGGACTATTGACG-TTTAGTCAAT---GGAAGTATGAGGCAATAACAG   [1380]
Chlorella_fus     GAGGGACTATTGGCG--TTAGTCAAT---GGAAGTATGAGGCAATAACAG   [1382]
Ankistrodesmus    GAGGGACTGTTGGCG--TTAGCCAAC---GGAAGTATGAGGCAATAACAG   [1380]
Pseudotreb_gig    GAGGGACTTTTGGCG-ACTAGCCAAA---GGAAGTGTG????????????   [1386]
Pleurastr_terr    GAGGGACTATTGGCG-TTT-GTCAAT---GGAA-TAT?????????????   [1388]
Characium_per     GAGGGACTTTCGGCG-TTTAGCCGAA---GGAAGTGTGAGGCGATAACAG   [1383]
Parietochl_pse    GAGGGACTCTCGGCG-ACTAGCCGAT---GGAAGTGTGAGGCGATAACAG   [1387]
Friedmannia_is    GAGGGACTTTTGGCGCCTTAGCCAAA---GGAAGTGTGAGGCGATAACAG   [1386]

[                          1460      1470      1480      1490      1500]
[                          .         .         .         .         .]

Glycine_max       GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1433]
Oryza_sativa      GTCTGTGATGCCCTTAGATGTTCTGGG--CGCACGCGCGCTACACTGATG   [1461]
Zamia_pumila      GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1461]
Psilotum_n        ??????????????????????????????????????????????????   [1455]
Equisetum_ar      ??????????????????????????????????????????????????   [1457]
Atrichum_angus    ??????????????????????????????????????????????????   [1439]
Notothylas_bre    ??????????????????????????????????????????????????   [1431]
Phaeoceros_lae    ??????????????????????????????????????????????????   [1442]
Porella_pi        ??????????????????????????????????????????????????   [1453]
Conocephal_con    ??????????????????????????????????????????????????   [1429]
Asterella_tene    ??????????????????????????????????????????????????   [1444]
Riccia            ??????????????????????????????????????????????????   [1445]
Klebsormid_fla    ??????????????????????????????????????????????????   [1466]
Coleochaet_nit    ??????????????????????????????????????????????????   [1437]
Fissidens_taxi    ??????????????????????????????????????????????????   [1441]
Plagiomnium_cu    ??????????????????????????????????????????????????   [1430]
Micromonas_pus    ??????????????????????????????????????????????????   [1446]
Mantoniel_squa    ??????????????????????????????????????????????????   [1410]
Nephroselm_pyr    ??????????????????????????????????????????????????   [1443]
Pedinomonas_mi    ??????????????????????????????????????????????????   [1429]
Tetraselm_cart    ??????????????????????????????????????????????????   [1442]
Enteromorpha      ??????????????????????????????????????????????????   [1449]
Ulva_fasci        ??????????????????????????????????????????????????   [1441]
Ulothrix_zo       ??????????????????????????????????????????????????   [1381]
Cympolia_barba    ??????????????????????????????????????????????????   [1459]
Batophora_oers    ??????????????????????????????????????????????????   [1420]
Codium_decort     ??????????????????????????????????????????????????   [1443]
Cladophoro        ??????????????????????????????????????????????????   [1434]
Blastophysa_rh    ??????????????????????????????????????????????????   [1433]
Trentepohlia      ??????????????????????????????????????????????????   [1435]
Cephaleuro_par    ?????????????????????????????CGCACGCGCGCTACACTGATG   [1427]
Characium_vac     GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1429]
Dunaliella_par    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1428]
Chlamyd_reinha    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGACG   [1430]
Volvox_carteri    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGACG   [1447]
Chlorococc_min    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1428]
Draparn_plum      ??????????????????????????????????????????????????   [1436]
Uronema_belk      ??????????????????????????????????????????????????   [1394]
Chlamydom_moew    ??????????????????????????????????????????????????   [1446]
Stephanos_pl      ??????????????????????????????????????????????????   [1449]
Carteria_rad      ??????????????????????????????????????????????????   [1454]
Gonium_pecto      ??????????????????????????????????????????????????   [1440]
Chlorella_kess    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1433]
Chlorella_vulg    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1435]
Protothec_wic     GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1430]
Chlorella_prot    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACAATGATG   [1436]
Chlorella_min     GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1433]
Neochloris_aqu    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1431]
Neochloris_vig    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1427]
Pediastrum_dup    GTCTGTGATGCCCTTAGATGTTCTGGGGCCGCACGTGCGCTACACTGATG   [1433]
Scenedesm_obl     GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1430]
Characium_hin     GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1429]
Chlorella_fus     GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1431]
Ankistrodesmus    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCAC-CGCGCTACACTGACG   [1428]
Pseudotreb_gig    ??????????????????????????????????????????????????   [1436]
Pleurastr_terr    ??????????????????????????????????????????????????   [1438]
Characium_per     GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGACG   [1432]
Parietochl_pse    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1436]
Friedmannia_is    GTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGATG   [1435]

[                          1510      1520      1530      1540      1550]
[                          .         .         .         .         .]

Glycine_max       TATTCAACGAGTCTATAGCCTTGGCCGACAGGTCCGGGTAATCTTTG-AA   [1482]
Oryza_sativa      TATCCAACGAGTATATAGCCTGGTCCGACAGGCCCGGGTAATCTTGGGAA   [1511]
Zamia_pumila      TATTCAACGAGTCTATAACCTGGGCCGGGAGGTCCGGGAAATCTGGCGAA   [1511]
Psilotum_n        ??????????????????????????????????????????????????   [1505]
Equisetum_ar      ??????????????????????????????????????????????????   [1507]
Atrichum_angus    ??????????????????????????????????????????????????   [1489]
Notothylas_bre    ??????????????????????????????????????????????????   [1481]
Phaeoceros_lae    ????????????????????????????????????????ATCTTTG-AA   [1491]
Porella_pi        ??????????????????????????????????????????????????   [1503]
Conocephal_con    ??????????????????????????????????????????????????   [1479]
Asterella_tene    ??????????????????????????????????????????????????   [1494]
Riccia            ??????????????????????????????????????????????????   [1495]
Klebsormid_fla    ??????????????????????????????????????????????????   [1516]
Coleochaet_nit    ??????????????????????????????????????????????????   [1487]
Fissidens_taxi    ???????????????????????????????????????AATCTTCTGAA   [1491]
Plagiomnium_cu    ??????????????????????????????????????????????????   [1480]
Micromonas_pus    ??????????????????????????????????????????????????   [1496]
Mantoniel_squa    ??????????????????????????????????????????????????   [1460]
Nephroselm_pyr    ??????????????????????????????????????????????????   [1493]
Pedinomonas_mi    ??????????????????????????????????????????????????   [1479]
Tetraselm_cart    ??????????????????????????????????????????????????   [1492]
Enteromorpha      ??????????????????????????????????????????????????   [1499]
Ulva_fasci        ????????????????????????????ACAGAGTCGGGTAATCTT-G-A   [1489]
Ulothrix_zo       ??????????????????????????????????????????????????   [1431]
Cympolia_barba    ????????????????????????????????????GG?AATCTATG-CA   [1508]
Batophora_oers    ??????????????????????????????????????????????????   [1470]
Codium_decort     ??????????????????????????????????????????????????   [1493]
Cladophoro        ??????????????????????????????????????????????????   [1484]
Blastophysa_rh    ??????????????????????????????????????????????????   [1483]
Trentepohlia      ??????????????????????????????????????????????????   [1485]
Cephaleuro_par    TATTCAACGAGTCTATAGCCTTGGCCGACAGGTCCGGGTAATCTTTG-AA   [1476]
Characium_vac     CATTCAACGAGCCTAT--CCTTGGCCGAGAGGTCCGGGTAATCTTTG-AA   [1476]
Dunaliella_par    CATTCAACGAGCCTAT--CCTTGGCCGAGAGGTCCGGGTAATCTTTG-AA   [1475]
Chlamyd_reinha    CGACCAACGAGCCTAT--CCTTGGCCGAGAGGCCCGGGTAATCTT-GTAA   [1477]
Volvox_carteri    CGACCAACGAGCCTAT--CCTTGGCCGAGAGGCCCGGGTAATCTT-GTAA   [1494]
Chlorococc_min    CATTCAACGAGCCTAT--CCTTGGCCGAGAGGCCCGGGTAATCTTTG-AA   [1475]
Draparn_plum      ??????????????????????????????????????????????????   [1486]
Uronema_belk      ??????????????????????????????????????????????????   [1444]
Chlamydom_moew    ????????????????????????-?????????????????????????   [1495]
Stephanos_pl      ??????????????????????????????????????????????????   [1499]
Carteria_rad      ??????????????????????????????????????????????????   [1504]
Gonium_pecto      ??????????????????????????????????????????????????   [1490]
Chlorella_kess    CAATCAACGAGCCTAG--CCTTGGCCGAGAGGCCCGGGTAATCTTTG-AA   [1480]
Chlorella_vulg    CATTCAACGAGCCTAG--CCTTGGCCGAGAGGCCCGGGTAATCTTCG-AA   [1482]
Protothec_wic     CATGCAACGAGCCTAG--CCTTGGCCGAGAGGCCCGGGTAATCTCAT-AA   [1477]
Chlorella_prot    CGGTCAACGAGCCCAG--CCTTGGCCGACAGGCCCGGGTAATCTCGC-AA   [1483]
Chlorella_min     CATTCAGCGAGCCTAG--CCTTGACCGAGAGGTCCGGGTAATCTTTG-AA   [1480]
Neochloris_aqu    CGTTCAACAAGCCTAT--CCTTGACCGAGAGGTCCGGGTAATCTTTG-AA   [1478]
Neochloris_vig    CGTTCAACAAGCCTAT--CCTTGACCGAGAG---CGGGTAATCTTTG-AA   [1471]
Pediastrum_dup    CATTCAACGAGCCTAT--CCTTGACCGAGAGGTCCGGGTAATCTTTG-AA   [1480]
Scenedesm_obl     CATTCAACAAGCCTAT--CCTTGACCGAAGGGTCTGGGTAATCTTTG-AA   [1477]
Characium_hin     CATTCAACGAGCCTAT--CCTTGGCCGAGAGGTCCGGGTAATCTTTG-AA   [1476]
Chlorella_fus     CATTCAACAAGCCTAT--CCTTGACCGAAAGGTCCGGGTAATCTTTG-AA   [1478]
Ankistrodesmus    CATTCAACGAGCCTAT--CCTTGACCGAGAGGTCTGGGTAATCTGTG-AA   [1475]
Pseudotreb_gig    ??????????????????????????????????????????????????   [1486]
Pleurastr_terr    ??????????????????????????????????????????????????   [1488]
Characium_per     CATTCAACGAGTCTAT--CCTTGGCCGAGAGGTCCGGGTAATCTGAG-AA   [1479]
Parietochl_pse    CATTCAACGAGCCTAG--CCTTGGCCGACAGGCCCGGGTAATCTTGC-AA   [1483]
Friedmannia_is    CAATCAACGAGCCTAT--CCTTGACCGACAGGTCCGGGTAATCTTTG-AA   [1482]

[                          1560      1570      1580      1590      1600]
[                          .         .         .         .         .]

Glycine_max       ATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGG   [1532]
Oryza_sativa      ATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGG   [1561]
Zamia_pumila      ATTTCATCGTGATGGGGATAGATCATTGCAATTATTGATCTTCAACGAGG   [1561]
Psilotum_n        ?????????????????????????????????????GTCTTCAAC-A-G   [1553]
Equisetum_ar      ??????????????????????????????????????TCTTCAACTAGG   [1557]
Atrichum_angus    ?????????????????ATAGATCATTGC-ATTATTGATCTTCAA--A-G   [1535]
Notothylas_bre    ???????????????GGA-AGATCATTGC-ATTATTGATCTTCAAC-AGG   [1528]
Phaeoceros_lae    ATTTCATCGTGAT--GGATAGATCATTGCAATTATTGATCTT-AA----G   [1534]
Porella_pi        ??????????????????????????????????????TCTTCAAC-AGG   [1552]
Conocephal_con    ??????????????????TAGATCATT?C?ATT?TTGATCTTGAA-----   [1524]
Asterella_tene    ??????????????????????????????????????????????????   [1544]
Riccia            ?????????????????????????TTGC?ATTATTGATCTTCAAC-A-G   [1543]
Klebsormid_fla    ??????????????????????????????????????????????????   [1566]
Coleochaet_nit    ????????????????????????????????????G-TCTCGAACGA-G   [1535]
Fissidens_taxi    ATTTCATCGTGAT--GGATAGATCATTGCAATTATTGATCTTCAAC-A-G   [1537]
Plagiomnium_cu    ?????????????????????ATCATTGC-ATTATTGATCTTCAAC---G   [1526]
Micromonas_pus    ???????????????????????????????????????????????AG-   [1545]
Mantoniel_squa    ??????????????????????????????????????????????????   [1510]
Nephroselm_pyr    ???????????????????????????????????????????????AGG   [1543]
Pedinomonas_mi    ??????????????????????????????????????????????????   [1529]
Tetraselm_cart    ??????????????????????????????????????????????????   [1542]
Enteromorpha      ??????????????????????????????????????????????????   [1549]
Ulva_fasci        AACT--ATCGT--TGGGA---AACATTGCAATTATTGTTCTTCAAC-AGG   [1531]
Ulothrix_zo       ??????????????????????????????????????????????????   [1481]
Cympolia_barba    CATGCTTCGTGAT?AGGACGAATATTGGAATTGTT-ATTCTTTAACG--G   [1555]
Batophora_oers    ??????????????????????????????????????????-???????   [1519]
Codium_decort     ?????????????????????????????????????????????????G   [1543]
Cladophoro        ??????????????????????????????????????????C-ACGAGG   [1533]
Blastophysa_rh    ??????????????????????AC-TGCAATT-T--GGTCT-CAACG--G   [1526]
Trentepohlia      ??????????????????????????????????????????-???????   [1534]
Cephaleuro_par    ATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGG   [1526]
Characium_vac     ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1526]
Dunaliella_par    ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1525]
Chlamyd_reinha    ACCGCGTCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1527]
Volvox_carteri    ACCGCGTCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1544]
Chlorococc_min    ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1525]
Draparn_plum      ????????????????????????????????????????????????GG   [1536]
Uronema_belk      ????????????????????????????????????AGTCTTCAAC-A-G   [1492]
Chlamydom_moew    ????????????????????????????????????????????????GG   [1545]
Stephanos_pl      ?????????????????????????????????????????????????G   [1549]
Carteria_rad      ??????????????????????????????????????TCTT-AACGAGG   [1553]
Gonium_pecto      ??????????????????????????????????????????????ACGG   [1540]
Chlorella_kess    ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAATCTTCAACGAGG   [1530]
Chlorella_vulg    ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAATCTTCAACGAGG   [1532]
Protothec_wic     CCTGCATCGTGATGGGGATAGATTATTGCAATTATTAATCTTCAACGAGG   [1527]
Chlorella_prot    CCCGCATCGTGATGGGGATAGATCATTGCAATTATTGATCTTCAACGAGG   [1533]
Chlorella_min     TCTGCATCGTGATGGGGATAGATTATTGCAATTATTAATCTTCAACGAGG   [1530]
Neochloris_aqu    ACCGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1528]
Neochloris_vig    ACCGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1521]
Pediastrum_dup    ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1530]
Scenedesm_obl     ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1527]
Characium_hin     ACTGCATCGTGATGGGGCTAGACTTTTGCAATTATTAGTCTTCAACGAGG   [1526]
Chlorella_fus     ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1528]
Ankistrodesmus    ACTGCGTCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAGG   [1525]
Pseudotreb_gig    ??????????????????????????????????????????????????   [1536]
Pleurastr_terr    ?????????????????????????????????????GTCTTCAACGAGG   [1538]
Characium_per     ACTGCGTCGTGACGGGGCTAGATTATTGCAATTATTAATCTTCAACGAGG   [1529]
Parietochl_pse    ACTGCATCGTGATGGGGCTAGATTATTGCAATTATTAATCTTCAACGAGG   [1533]
Friedmannia_is    ACTGCATCGTGATGGGGATAGATTATTGCAATTATTAATCTTCAACGAGG   [1532]

[                          1610      1620      1630      1640      1650]
[                          .         .         .         .         .]

Glycine_max       AATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1581]
Oryza_sativa      AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1610]
Zamia_pumila      AATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1610]
Psilotum_n        AATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1602]
Equisetum_ar      AATTCCTAGTAAGC-CGAGTCATCAGCTCGCGTTGACTA--GTCCCTGCC   [1604]
Atrichum_angus    AATTCC-AGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1583]
Notothylas_bre    AAT-CCT-GTAAGCGCGAGTCATCAGCTCGCGTT-ACTAC-GTCCCTGCC   [1574]
Phaeoceros_lae    AATT--TAGTAAGCGCGAGTCATCAGCTCG-GTTGACTA--GTCCCTGCC   [1579]
Porella_pi        AAT-CCTAGTAAGC-CGAGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1599]
Conocephal_con    AATTCC--GTA--CGCGAGTC-T----TCGCGCTGATT-C-GTCCCTGCC   [1563]
Asterella_tene    ?????????????????AGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1593]
Riccia            AATTCC-AGTAA---CGAGTCGAACAGTCGCGCTGACTAC-GTCCCTGCC   [1588]
Klebsormid_fla    ???????????????????????????TCGCGTTGATTTA-GTCCCTGCC   [1615]
Coleochaet_nit    AATACCTAGTAAGCGCTCGTCATCAGCGTGCGCT-ACTAC-GTCCCTGCC   [1583]
Fissidens_taxi    AATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1586]
Plagiomnium_cu    AATTCC-AGTAAGCGCGAGTCATCAGCTCG-GTTGACTAC--TCCCTGCC   [1572]
Micromonas_pus    AATGCCT-GTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1593]
Mantoniel_squa    ??????????????????????????????????????????????????   [1560]
Nephroselm_pyr    AATGCCT-GTAA--GCGAGTCATCAGCTCGCGTTGATTA--GTCCCTGCC   [1588]
Pedinomonas_mi    ?????????????????????????????????????????GTCCCTGTC   [1579]
Tetraselm_cart    ???????????????????TCATCAGATCGCGTTGATTA--GTCCCTGCC   [1590]
Enteromorpha      ????CCTAGTAAGCGCGAGTCATCATCTCGCGTTGATTAC-GTCCCTGCC   [1598]
Ulva_fasci        AATGCCTAGTAAG--CGAGTCATCATCTCGCGTTGATTAC-GTCCCTGCC   [1578]
Ulothrix_zo       ?????????????????????????????G-GTT-ATTA---TCCCT-CC   [1525]
Cympolia_barba    AATGCCTAGTAAGTACCAGTCATCAACCGGTGTTGATTAT-GTCCCTGCT   [1604]
Batophora_oers    ????????????????????????AGCTTGCGTTGATTA----CCCTGCC   [1565]
Codium_decort     AATGCCTAGTA---CCGGGT--GGATCCCGCGACGATTGC-GTCCCTGCC   [1587]
Cladophoro        AATGC-T-GT-AGCGCGAGTCATCAACTCGCGTTGATTAC-GTCCCTGCC   [1579]
Blastophysa_rh    AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1575]
Trentepohlia      ??????????????????????????????CGTTGATTAT---CCCTGCC   [1581]
Cephaleuro_par    AATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC-GTCCCTGCC   [1575]
Characium_vac     AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1575]
Dunaliella_par    AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1574]
Chlamyd_reinha    AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1576]
Volvox_carteri    AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1593]
Chlorococc_min    AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1574]
Draparn_plum      AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACCGTCCCTGCC   [1586]
Uronema_belk      AATGCCTAGTAAGCG--AGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1539]
Chlamydom_moew    AATGCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1594]
Stephanos_pl      AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1598]
Carteria_rad      AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1602]
Gonium_pecto      AATGCCTAGTAAGCGCGAGTCATCAGCTCG-GTTGATTAC-GTCCCTGCC   [1588]
Chlorella_kess    AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1579]
Chlorella_vulg    AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1581]
Protothec_wic     AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1576]
Chlorella_prot    AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1582]
Chlorella_min     AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1579]
Neochloris_aqu    AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1577]
Neochloris_vig    AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1570]
Pediastrum_dup    AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1579]
Scenedesm_obl     AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1576]
Characium_hin     AATGCCTAGTAAGCGCGATTCATCAGATCGCGTTGATTAC-GTCCCTGCC   [1575]
Chlorella_fus     AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1577]
Ankistrodesmus    AATGCCTAGTAGGCGCGATTCATCAGATCGCGCCGATTAC-GTCCCTGCC   [1574]
Pseudotreb_gig    ????CCTAGTAAGCG--AGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1583]
Pleurastr_terr    AATGCCTAGTAAGCG--AGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1585]
Characium_per     AATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTAC-GTCCCTGCC   [1578]
Parietochl_pse    AATGCCTAGTAAGGCCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1582]
Friedmannia_is    AATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC-GTCCCTGCC   [1581]

[                          1660      1670      1680      1690      1700]
[                          .         .         .         .         .]

Glycine_max       CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1628]
Oryza_sativa      CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1657]
Zamia_pumila      CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCC---GGTGA   [1657]
Psilotum_n        CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1649]
Equisetum_ar      CTTTGTACACACTGCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1651]
Atrichum_angus    CTTTGTACACACC-CCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1629]
Notothylas_bre    CTTTGTACACAC-GCC-GTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1619]
Phaeoceros_lae    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1626]
Porella_pi        CTTTGTACACAC--CCCGTCGCTCCTACCGATTGAATGGTCC----GTGA   [1643]
Conocephal_con    CTTTGT-C-C-CCGCCC--CGCTCCT-CCGATTGAATGGTCC---GGTGA   [1604]
Asterella_tene    CTTTGTACACAC-GCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1639]
Riccia            CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1635]
Klebsormid_fla    CTTTGTACACAC-GCCCGTCGCTCCTACCGATTGAATGATCC---GGTGA   [1661]
Coleochaet_nit    CTTTGTACACAC-GCCCGTCGCTCCTACCGATAGAATGCTCC---GGTGA   [1629]
Fissidens_taxi    CTTTGTACACAC--CCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1631]
Plagiomnium_cu    CTTTGTACACAC--CCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1617]
Micromonas_pus    CTTTGTACACACC-CCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1639]
Mantoniel_squa    ??????????????????????????????????????????????????   [1610]
Nephroselm_pyr    CTTTGTACACAC--CCCGTCGCTCCTACCGATTGAATG-TGC--TGGT?A   [1633]
Pedinomonas_mi    CTTTGTAC-CAC-GCCCGT-GCTACTACCGATTGAATC-TTT---GGTGA   [1622]
Tetraselm_cart    CTTTGTACACAC--CCCGTCGCTCCTACCGATTGAATG-TG--TTGGTGA   [1635]
Enteromorpha      CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAACG-TGC--TG--GA   [1643]
Ulva_fasci        CTTTGTACACAC-GCCCGTCGCTCCTACCGATTGAACG-TGC--TGGTGA   [1624]
Ulothrix_zo       CTTTGTACA-AC--CCCGTC---CC--CCGATTGAATG--GC-GTAAAGA   [1564]
Cympolia_barba    CTTTGT-CTCACCGCC-GTCGCTTGATCCGACGTTAC-AGT---TGGTGA   [1648]
Batophora_oers    CTYT--AC-CAC--CC-GTCGCTTGATCCTGTCTTGC-A-T----YGTGA   [1603]
Codium_decort     CTTTGTACACAC-GCC-GTCGCT-GATACTGATGGCAG-AAC--TGG--A   [1629]
Cladophoro        GTTTGTACACACCGCCCGTCGCTCC-ACCGATTGGGTG-TGCG-T---GA   [1623]
Blastophysa_rh    CTTTGT-C-C-CCGCC-GTCGCTCCTACC-ATT-GATG-TGC--TGGTGA   [1616]
Trentepohlia      ----GTAC-C-CC-CCCGT-GCTCCTTCCGATTGGGTG-TGG--TGGTGA   [1620]
Cephaleuro_par    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCC---GGTGA   [1622]
Characium_vac     CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1622]
Dunaliella_par    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1621]
Chlamyd_reinha    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1623]
Volvox_carteri    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1640]
Chlorococc_min    CTTTGTACACAC-GCCCGTCGCTCCTACCGATTGAGTG-TGC--TGGTGA   [1620]
Draparn_plum      CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-T-C--TGGT-A   [1631]
Uronema_belk      CTTTGTACACAC-GCCCGTCGCTCCT-CCGATTGGGTG-TGT--GGGTGA   [1584]
Chlamydom_moew    CTTTGTACWYWC-GCCCGTYGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1640]
Stephanos_pl      CTTTGTACACACCGCCCGTCGCTCC-ACCGATTGGGTG-TGC--TGGTGA   [1644]
Carteria_rad      CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1649]
Gonium_pecto      CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1635]
Chlorella_kess    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1626]
Chlorella_vulg    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1628]
Protothec_wic     CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1623]
Chlorella_prot    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGAGTG-TGC--TGGTGA   [1629]
Chlorella_min     CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1626]
Neochloris_aqu    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1624]
Neochloris_vig    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1617]
Pediastrum_dup    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1626]
Scenedesm_obl     CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1623]
Characium_hin     CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1622]
Chlorella_fus     CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1624]
Ankistrodesmus    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1621]
Pseudotreb_gig    CTTTGTACACAC-GCCCGTCGCTCCTACCGATTGGGTG-TGC--T-GTGA   [1628]
Pleurastr_terr    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1632]
Characium_per     CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1625]
Parietochl_pse    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGGTG-TGC--TGGTGA   [1629]
Friedmannia_is    CTTTGTACACACCGCCCGTCGCTCCTACCGATTGGATG-TGC--TGGTGA   [1628]

[                          1710      1720      1730      1740      1750]
[                          .         .         .         .         .]

Glycine_max       AGTGTTCGG--ATTGCGGT-------------------------------   [1645]
Oryza_sativa      AGTGTTCGG--ATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGC   [1705]
Zamia_pumila      AGTGTTCGG--ATCGTGCCGACGACGGCGGTTCGCTGGGCGCGACGTCGC   [1705]
Psilotum_n        AGTTTTCGG--ATTGCGGCGAGCGGTCCGCCGGCACGTTGT---------   [1688]
Equisetum_ar      AGTTTTCGG--ATT-CGGCGACGCTGGCGGT-CGCCGGCGACGTTGT---   [1694]
Atrichum_angus    AGTTTTCGG--ATCG--GG-TG-ATCGGGTT-G-GTTCGG?GACTTGT--   [1669]
Notothylas_bre    AGTTTTCGG--ATTG-CGGCGACACCGGGTCACCGCCGGGGACGTT-T--   [1663]
Phaeoceros_lae    AGTTTTCGG--ATTG-CGGCG?ACA?CGGGT?ACCGCCGGGACGTTGT--   [1671]
Porella_pi        AGTTTTCGG--ATTGCGGCGACGCGGCGGTTCGCTGCCGGGACGTTGT--   [1689]
Conocephal_con    AGAGTTCGG--A-CG-CGGCG?ACGTGC?GTCGCCGCCGGGACGTTGT--   [1648]
Asterella_tene    -GAGTTCGG--ATCG-CGGCGACGCGCGGTTCGCCGCCGGGACGTTG---   [1682]
Riccia            -GAGTTCGG--ATCG----CGAC-----GTTCGCCGC-GGGACGTTGT--   [1670]
Klebsormid_fla    AGTTTTCGG--ATTGCGGCTACTGGTCCGCCGCCGAAGAAGCTGTGAG--   [1707]
Coleochaet_nit    AGCATTCGG--ATCGCCACCGGCGGGCAACTCCGGAGACGGCATG-----   [1672]
Fissidens_taxi    AGTTTTCGG--ATTG-CG?CG?AC?GGGTTCGCCGCGCGCTGT-------   [1671]
Plagiomnium_cu    AGTTTTCGG--ATCG-CG??A?C????GTTCGCCGC?GG?GACGTTGT--   [1662]
Micromonas_pus    AGCGTTCGG--ACCGT-GGCTTTCTGA??G?TTCG?CCGTCGGATGGCCT   [1686]
Mantoniel_squa    ??????????????????????????????????????????????????   [1660]
Nephroselm_pyr    GGAGTCCGG--AT?AT???GCGGGTGGGTCC?GCCG?C?TCCGCCCGT--   [1679]
Pedinomonas_mi    GGCTCACGG--ACTGTCGTGCTTCCTTCCTCGTGTTGGTTGTACTTC---   [1667]
Tetraselm_cart    GGAGTT?GG--ATTGGCAGTTTGTGGTGG?TTCG?CCACTGCTTACAGCT   [1683]
Enteromorpha      AGCGTTAGG--ACTGG--AACCTTGGGCCGGTCTCCTGCCCATGGTTTC-   [1688]
Ulva_fasci        AGCGTTAGG--ACTGGAACTTTGGCCGGTCTCCTGCCCATTGTTTC----   [1668]
Ulothrix_zo       TTTGCGGAATTGCT-TTCACGTTAGTTCCAAGCTCTTACCAC--------   [1605]
Cympolia_barba    ACTGTTTGG--ATTATCCTTGTTCCGTGAAGACGTTACAGGTT-------   [1689]
Batophora_oers    AAAGTTTGG--AT--GYCTTCCGAAA?CGGTTACGCCTA-----------   [1638]
Codium_decort     A--CCGGGG--ACGC-GCC?TTT??TGGGAGCCCCGCT------------   [1662]
Cladophoro        AAT-TTCGG--ATTAGACAACCTACCGT?AGGG?GTCGT?T---------   [1661]
Blastophysa_rh    AGCA-ACG---ACT-TGGA?CACCCTCGGGT?ATTTGC------------   [1649]
Trentepohlia      AGAGTTCGG--ACTGGACCAGGCTAGCAATA--CCC--TTG--------G   [1656]
Cephaleuro_par    AGTGTTCGG--ATTGCGGCGACGTGAGCGGTTCGCTGCCCGCGACGTTGT   [1670]
Characium_vac     AGTGTTCGG--ACTGGCT--------------------------------   [1638]
Dunaliella_par    AGTGTTTGG--ACTG-GTT-------------------------------   [1637]
Chlamyd_reinha    AGTGTTCGG--ATTGAGCT-------------------------------   [1640]
Volvox_carteri    AGTGTTCGG--ATTGACTTTGACTGGGGCAACCTGGTCATGGTT------   [1682]
Chlorococc_min    AGTGTTCGG--ACTTGCG--------------------------------   [1636]
Draparn_plum      AGCGTTCGG--A-TGAAGCGGTGGGACTCTCCTGCCCTCCC---------   [1669]
Uronema_belk      AGCGCTCGG--AT?GGGGCGGTCGGAGTCTCCCACCCCCT----------   [1622]
Chlamydom_moew    AGTGTTCGG--ATTGGCTTTGAGGGG-TGG-CAACTCCCCAG-AGCC---   [1682]
Stephanos_pl      AGTGTTGGG--ATTGACTT--AGTGG-TGGGCA-CTCCA-TGTTGTT---   [1684]
Carteria_rad      AGTGTTCGG--ATCGGA-GTCCTTGGCTGG-CAACAGTTGAGGTTTCT--   [1693]
Gonium_pecto      AGTGTTCGG--ATTGATC--GGCTGG---GGCAACTCGGCCTTGATT---   [1675]
Chlorella_kess    AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1671]
Chlorella_vulg    AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1673]
Protothec_wic     AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1668]
Chlorella_prot    AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1674]
Chlorella_min     AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1671]
Neochloris_aqu    AGTGTTCGG--ATTGGCC??????????????????????????????--   [1670]
Neochloris_vig    AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1662]
Pediastrum_dup    AGTGTTCGG--ATTGGCC??????????????????????????????--   [1672]
Scenedesm_obl     AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1668]
Characium_hin     AGTGTTCGG--ATTGGCC??????????????????????????????--   [1668]
Chlorella_fus     AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1669]
Ankistrodesmus    AGTGTTCGG--ATTGGC???????????????????????????GC-C--   [1666]
Pseudotreb_gig    AGCGTTCGG--ATTGCGTTAGTCGGGTTTTCCGCCTCCTCTCACT-----   [1671]
Pleurastr_terr    AAAGTTTGG--ACTGGCGGTAGGCGGGTGGTTCGCCATCTGCTGCTGCC-   [1679]
Characium_per     AGTGTTCGG--ATCGGCT??????????????????????????????--   [1671]
Parietochl_pse    AGTGTTCGG--ATTGGCC??????????????????????????????--   [1675]
Friedmannia_is    AGTGTTCGG--ATTGGCC??????????????????????????????--   [1674]

[                          1760      1770      1780      1790      1800]
[                          .         .         .         .         .]

Glycine_max       GAGAAGTCCACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAG   [1695]
Oryza_sativa      GAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAG   [1755]
Zamia_pumila      GAGAAGTTCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAG   [1755]
Psilotum_n        GAGAAGTTCATTAAACCTTATCATTTAGAGGAA?????????????????   [1738]
Equisetum_ar      GAGAAGTTCATTGAACCTTACCATTTAGAG????????????????????   [1744]
Atrichum_angus    GAGAA-TTCATTAAA--TTATCATTTAGAGGAA?????????????????   [1716]
Notothylas_bre    GA-AA-TTCATTAAACCTTATCATTTA?A?????????????????????   [1711]
Phaeoceros_lae    GAGAAG-TCATTAAACCTTATC-TTTAGAGGAA?????????????????   [1719]
Porella_pi        GAGAAGTTTATTAAACCTTATCATTTA?A?????????????????????   [1739]
Conocephal_con    GAGAAGTTCTTT-AACCTTATCA-TTAGA?????????????????????   [1696]
Asterella_tene    GA-AAGTTCTTTAAACCTTATCA???????????????????????????   [1731]
Riccia            GAGAAGTTCTTTAAACCTTATC-TTTAGA?????????????????????   [1719]
Klebsormid_fla    GCAAGGTTCATTAAACCTTATCATTTAGAGGA??????????????????   [1757]
Coleochaet_nit    -AGAA-TT-GTTGAACCTTATCGTTTAGAGGA??????????????????   [1719]
Fissidens_taxi    GAGAAGTTCATTAAACCTTATCATTTAGA--A??????????????????   [1719]
Plagiomnium_cu    GAGAAG-TCATTAAACCTTATCATTTA-AG????????????????????   [1710]
Micromonas_pus    GGGAAGTTCGTT-AACCTTATCA???????????????????????????   [1735]
Mantoniel_squa    ??????????????????????????????????????????????????   [1710]
Nephroselm_pyr    CAGAAGTTCTTCAAACCCTCGCATTTAGAG????????????????????   [1729]
Pedinomonas_mi    GGGAAGT--ATACA--CCTGATGATTAGAGGA??????????????????   [1713]
Tetraselm_cart    GAGAAGTTCTCCAAACCCCCCCATT-AG??????????????????????   [1732]
Enteromorpha      --GAATTTCGTT-AACCCTC--GTTTAGAG-A??????????????????   [1732]
Ulva_fasci        GGGAATTTCGTT-AACCCTCCC????????????????????????????   [1717]
Ulothrix_zo       GAGAAGTT-ATT-AACCCTCCCA???????????????????????????   [1653]
Cympolia_barba    --GAAATTCGGTGAACC-----ACCTGTTAT???????????????????   [1732]
Batophora_oers    --GAA-TTCTCTTAACC-----ACCT-TTA????????????????????   [1679]
Codium_decort     AACCACTTTTCTAA????????????????????????????????????   [1712]
Cladophoro        GAGAAGTTCATTAACCCTTCACC?AGAG?AA???????????????????   [1711]
Blastophysa_rh    GGGAAATGTGTTAAACCCTCCCATCTA?A?????????????????????   [1699]
Trentepohlia      GGAAGTCCGTTTAAACCCTCCCTA??????????????????????????   [1706]
Cephaleuro_par    GAGAAGTCCACTGAACCTTATCATTTAGAGGAAGGA??????????????   [1720]
Characium_vac     GGGAAGAACATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1688]
Dunaliella_par    GGGAAGAACATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1687]
Chlamyd_reinha    GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1690]
Volvox_carteri    GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1732]
Chlorococc_min    GGGAAGAACATTAAACCCTCCCACTTAGAGGAAGGAGAAGTCGTAACAAG   [1686]
Draparn_plum      GAGAAGTTCGTTAAACCCTCCCACC?????????????????????????   [1719]
Uronema_belk      GAGAAGTCCGTTAAACCCTCCCACCTA-AGGAA?????????????????   [1671]
Chlamydom_moew    GAGAAGATCATTAAACCCTCCCACCTAGAG????????????????????   [1732]
Stephanos_pl      GAGAACAACATTAAACCCTCCCACCTAGA--???????????????????   [1732]
Carteria_rad      GAGAAGTTCATTAAACCCTCCC????????????????????????????   [1743]
Gonium_pecto      GAAAAGTTCATTAAACCCTCCCAC??????????????????????????   [1725]
Chlorella_kess    -AGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1720]
Chlorella_vulg    GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1723]
Protothec_wic     GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1718]
Chlorella_prot    GAGAAGTTCATTAAACCCTCCCACTTAGAGGAAGGAGAAGTCGTAACAAG   [1724]
Chlorella_min     GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1721]
Neochloris_aqu    AAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1720]
Neochloris_vig    AACAAGT-CATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1711]
Pediastrum_dup    GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1722]
Scenedesm_obl     GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1718]
Characium_hin     AAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1718]
Chlorella_fus     GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1719]
Ankistrodesmus    GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1716]
Pseudotreb_gig    GAGAAGTTCGTTAAACCCTCCCACCT-GAG-A??????????????????   [1719]
Pleurastr_terr    GGGAAATTCTTTAAACCCTCCCACCTAGAG-AA?????????????????   [1728]
Characium_per     GAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAG   [1721]
Parietochl_pse    GAGAAGTTCATTAAACCCTCCCACCTAGAGTAAGCAGAAGTCGTAACAAG   [1725]
Friedmannia_is    GAGAAGTTCTCTAAACCCTCCCATCTAGAGGAAGGAGAAGTCGTAACAAG   [1724]

[                          1810      1820      1830      1840      1850]
[                          .         .         .         .         .]

Glycine_max       GTTTCCGTAG???????????????????????????????????GACCC   [1745]
Oryza_sativa      GTTTCCGTAG???????????????????????GCACCGCTGGCCGACCC   [1805]
Zamia_pumila      GTTTCCGTAG????????????????????????????????????????   [1805]
Psilotum_n        ??????????????????????????????????????????????????   [1788]
Equisetum_ar      ?????????????????????????????????GCACCATCGACCGACCG   [1794]
Atrichum_angus    ?????????????????????????????????GCAC?AT?GACCGACCG   [1766]
Notothylas_bre    ???????????????????????????????????????????????CC?   [1761]
Phaeoceros_lae    ?????????????????????????????????GCACCATCGACCGACCA   [1769]
Porella_pi        ??????????????????????????????????????????????????   [1789]
Conocephal_con    ????????????????????????????????????CCAGCGACCATGAG   [1746]
Asterella_tene    ?????????????????????????????????T?AACATCGACCGACCA   [1781]
Riccia            ??????????????????????????????????????????????????   [1769]
Klebsormid_fla    ??????????????????????????????????????????????????   [1807]
Coleochaet_nit    ??????????????????????????????????CACCACGCGCCGATCC   [1769]
Fissidens_taxi    ??????????????????????????????????????????????????   [1769]
Plagiomnium_cu    ?????????????????????????????????GCACCATCGACCGACCG   [1760]
Micromonas_pus    ??????????????????????????????????????????????????   [1785]
Mantoniel_squa    ??????????????????????????????????????????????????   [1760]
Nephroselm_pyr    ??????????????????????????????????????????????????   [1779]
Pedinomonas_mi    ??????????????????????????????????????????????????   [1763]
Tetraselm_cart    ????????????????????????????????????CCATCGACCGACCA   [1782]
Enteromorpha      ??????????????????????????????????????????ACC?ACCA   [1782]
Ulva_fasci        ???????????????????????????????????????????????CCA   [1767]
Ulothrix_zo       ??????????????????????????????????????????????????   [1703]
Cympolia_barba    ??????????????????????????????????TGTGTTAAGCACCGAG   [1782]
Batophora_oers    ??????????????????????????????????????????????????   [1729]
Codium_decort     ??????????????????????????????????????????????????   [1762]
Cladophoro        ??????????????????????????????????????????GCCAACCA   [1761]
Blastophysa_rh    ?????????????????????????????????????????GACCGACCA   [1749]
Trentepohlia      ??????????????????????????????????????????????????   [1756]
Cephaleuro_par    ???????????????????????????????????????????GCTGCCA   [1770]
Characium_vac     GTTTCCGTAG????????????????????????????????????????   [1738]
Dunaliella_par    GTTTCCGTAG????????????????????????????????????????   [1737]
Chlamyd_reinha    GTTTCCGTAG????????????????????????????????????????   [1740]
Volvox_carteri    GTTACCGTAGGTGAACCTGCGGAAGGATCATTG?????????????????   [1782]
Chlorococc_min    GTTTCCGTAG????????????????????????????????????????   [1736]
Draparn_plum      ???????????????????????????????????????????????CC?   [1769]
Uronema_belk      ??????????????????????????????????????????????????   [1721]
Chlamydom_moew    ???????????????????????????????????????TCGACCGACC?   [1782]
Stephanos_pl      ?????????????????????????????????GCACCATCGACCGACCA   [1782]
Carteria_rad      ?????????????????????????????????GCACCATCGACCGACCA   [1793]
Gonium_pecto      ?????????????????????????????????GCACCATCGACCGACCA   [1775]
Chlorella_kess    GTTTCCG???????????????????????????????????????????   [1770]
Chlorella_vulg    GTTTCCG???????????????????????????????????????????   [1773]
Protothec_wic     GTTTCCG???????????????????????????????????????????   [1768]
Chlorella_prot    GTTTCCG???????????????????????????????????????????   [1774]
Chlorella_min     GTTTCCG???????????????????????????????????????????   [1771]
Neochloris_aqu    GTTTCCGTAG????????????????????????????????????????   [1770]
Neochloris_vig    GTTTCCG???????????????????????????????????????????   [1761]
Pediastrum_dup    GTTTCCGTAG????????????????????????????????????????   [1772]
Scenedesm_obl     GTTTCCG???????????????????????????????????????????   [1768]
Characium_hin     GTTTCCGTAG????????????????????????????????????????   [1768]
Chlorella_fus     GTCTCCG???????????????????????????????????????????   [1769]
Ankistrodesmus    GTTTCCG???????????????????????????????????????????   [1766]
Pseudotreb_gig    ??????????????????????????????????????????????????   [1769]
Pleurastr_terr    ??????????????????????????????????????????????????   [1778]
Characium_per     GTTTCCGTAG????????????????????????????????????????   [1771]
Parietochl_pse    GTTTCCGTAG????????????????????????????????????????   [1775]
Friedmannia_is    GTTTCCGTAG????????????????????????????????????????   [1774]

[                          1860      1870      1880      1890      1900]
[                          .         .         .         .         .]

Glycine_max       TGAT?CTTCT?TGAAGGGTTC?GAGTGAGAGCA?TACCTGTCGGGACCCG   [1795]
Oryza_sativa      TGAT?CTTCTGTGAAGGGTTC?GAGTTGGAGCA?CGCCTGTCGGGACCCG   [1855]
Zamia_pumila      ??????????????????????????????????????????????????   [1855]
Psilotum_n        ??????????????????????????????????????????????????   [1838]
Equisetum_ar      TGAT?CTTCTGTGAAAGGTTT?GAGTGAGAGCA?TACCTGCTGGGACCC?   [1844]
Atrichum_angus    TGAT?CTTCTGTGAAAGGTTT?GAGTGTGAGC??T?CCTGCTGGGACCC?   [1816]
Notothylas_bre    TGAT?CTTCTGTGA?AGGTTT?GAGTGTGAGCA?TACCTGCTGGGACCC?   [1811]
Phaeoceros_lae    TGAT?CTTCTGTGAAAGGTTT??AGTGTGA??A?TACCTGCTGGGACCC?   [1819]
Porella_pi        ??????????????????????????????????????????????????   [1839]
Conocephal_con    CATC?TCGATGCGAAAGGTT??GAGT??GAGCG?TGCCTGTTGGGACCC?   [1796]
Asterella_tene    TGAT?CTTCTGTGAAAGGTTC?G?GT?GGAGCA?TGCCTGTTGGGACCC?   [1831]
Riccia            ????????????A?AAGGTTCGGAGTAAGAGCAT?GCCT?TTGGGACCC?   [1819]
Klebsormid_fla    ??????????????????????????????????????????????????   [1857]
Coleochaet_nit    GGAGA?ATGTCGGAAGGGTTC?GAGCTGAGA?A??GTATGTTGGGACCC?   [1819]
Fissidens_taxi    ??????TTCTGTGAAAGGTTC?GAGTGTGAGCA?TACCTGTTGGGAC???   [1819]
Plagiomnium_cu    TGAT?CTTCTGTGAAAGGTTT?GAGTGTGAGCA?CACATGTTGGGACCC?   [1810]
Micromonas_pus    ??????????????????????????????????????????GGGACC??   [1835]
Mantoniel_squa    ??????????????????????????????????????TGCTGGGACC??   [1810]
Nephroselm_pyr    TGAT?CTTCTGTGAAAGGTTT?GAGT?CGAGCA??ACCTGTTGGGACC??   [1829]
Pedinomonas_mi    ?????????????????????????????AGCA?GATATGTTGG??CCC?   [1813]
Tetraselm_cart    TGAT?CTTTTGTGAAAGGTTT?GAGTACGAGCA?TACCTGTTGGGACCC?   [1832]
Enteromorpha      T?AT?CTTCTGTGAAAGG?TC??A?TACGA??G?TACCTTTTGGGACCCT   [1832]
Ulva_fasci        TGAT?C?TCTGTGAAAGGTT??GAGTACGAGCG?TACCTGTTGGGACC??   [1817]
Ulothrix_zo       ??AT?CTTCTGTGAT?GGTTC?GAGTACGAGCAGTACCT?TTGGGACCC?   [1753]
Cympolia_barba    TTCT?CTTTTACGAAAAACTC?GAGTGTGAGCA?TGCCGTT?A?GATCT?   [1832]
Batophora_oers    ?????????????????????????????????????????TGG?ACC??   [1779]
Codium_decort     ??????????????????????????????????????????????????   [1812]
Cladophoro        TGATGCTTTTGTG??AGGTTT?GAGC??GAGCG?CAGTCG?TAGGACCCG   [1811]
Blastophysa_rh    TGAT?CTTCTGAGAAAGGTTC?GAGTTGGAGCG?TGCCT?TTGGGACCC?   [1799]
Trentepohlia      ??TC?CTCACAT?ATATCTTT?T?ATTCATAAC?TACCT?TTGGGACCC?   [1806]
Cephaleuro_par    TGAT?CTTCTGTG???GGTTC?GAGTAGGAGCG?G?CCTGTTGGGACCGG   [1820]
Characium_vac     ??????????????????????????????????????????????????   [1788]
Dunaliella_par    ??????????????????????????????????????????????????   [1787]
Chlamyd_reinha    ??????????????????????????????????????????????????   [1790]
Volvox_carteri    ??????????????????????????????????????????????????   [1832]
Chlorococc_min    ??????????????????????????????????????????????????   [1786]
Draparn_plum      TGAT?CTTCTGTGAAAGGT???GAGTACGAGCA?TACCT?TTGGGACCC?   [1819]
Uronema_belk      ??????????????????????GAGT?CGAGCA??ACCT?TTGGGACCC?   [1771]
Chlamydom_moew    TAGAGCTTCTGCGAAAGGTTT?GAGTGCGAGCA?TA?ATGTTGGGACC??   [1832]
Stephanos_pl      TGAT?CTTCTGTGAAAGGTTT?GAGTGCGAGCA?TACCTGTTGGGACCC?   [1832]
Carteria_rad      TGA?GCTTCTGC?AAAGGTTT?GAGTGCG?GTG?T?ACT?TTGGGACCC?   [1843]
Gonium_pecto      TGTTGCTTTTGCGAAAGGTT??GAGTGCGAGCA?TACCTGTTGGGACCC?   [1825]
Chlorella_kess    ??????????????????????????????????????????????????   [1820]
Chlorella_vulg    ??????????????????????????????????????????????????   [1823]
Protothec_wic     ??????????????????????????????????????????????????   [1818]
Chlorella_prot    ??????????????????????????????????????????????????   [1824]
Chlorella_min     ??????????????????????????????????????????????????   [1821]
Neochloris_aqu    ??????????????????????????????????????????????????   [1820]
Neochloris_vig    ??????????????????????????????????????????????????   [1811]
Pediastrum_dup    ??????????????????????????????????????????????????   [1822]
Scenedesm_obl     ??????????????????????????????????????????????????   [1818]
Characium_hin     ??????????????????????????????????????????????????   [1818]
Chlorella_fus     ??????????????????????????????????????????????????   [1819]
Ankistrodesmus    ??????????????????????????????????????????????????   [1816]
Pseudotreb_gig    ??????????????????????????????????????????GGG?CCC?   [1819]
Pleurastr_terr    ??????????????????????????????????????????????????   [1828]
Characium_per     ??????????????????????????????????????????????????   [1821]
Parietochl_pse    ??????????????????????????????????????????????????   [1825]
Friedmannia_is    ??????????????????????????????????????????????????   [1824]

[                          1910      1920      1930      1940      1950]
[                          .         .         .         .         .]

Glycine_max       AAAGATGGTGAACT?TGCCTGAGCGGGG?CGAAGCCAGAGGAAACTCTGG   [1845]
Oryza_sativa      AAAGATGGTGAACTATGCCTGAGCGGGG?CGAAGCCAGAGGAAACTCTGG   [1905]
Zamia_pumila      ??????????????????????????????????????????????????   [1905]
Psilotum_n        ??????????????????????????????????????????????????   [1888]
Equisetum_ar      AAAGATGGTGAACTATGCCTGAGCAGGG?CGAAGCCAGAGGAAACTCTGG   [1894]
Atrichum_angus    ?AAGATGGTGAACTATGCCTGAGC?AGG?CGAAGCCAGAGGAAACTCTGG   [1866]
Notothylas_bre    ???GATGGTGA?CTATGCCTGAGCAGGG?CGAAGCCAGAGGAAACTCTGG   [1861]
Phaeoceros_lae    ?AAGATGGTGAACTATGCCTGAGTCAGG?CGAAGCCAGAGGAAACTCTGG   [1869]
Porella_pi        ??????????????????????????????????????????????????   [1889]
Conocephal_con    ?AAGATGGTGA?CTATGC?TGAGCAGG??CGAAGCCGGAGGAAACTCCGG   [1846]
Asterella_tene    ?AAGATGGTGAACTATGC?TGAGCAGGG?CGAAGTCAGAGGAAACTCTGG   [1881]
Riccia            ?AAGATGGTGAACTAT???TGAG?A?GG?CGAAGCCAGAGGAAACTCTGG   [1869]
Klebsormid_fla    ??AGATGGTGAACTATGCCTGAGGCAGG?CGAAGCCAGAGGAAACTCTGG   [1907]
Coleochaet_nit    ??AGATGGTGAACTATGCCTGA??AGG??CGAAGCCAGAGGAAACTCTGG   [1869]
Fissidens_taxi    ?AAGATGGTGAACTAT???TGA???AGG?CGAAGCCAGAGGAAACTCTGG   [1869]
Plagiomnium_cu    ??AGATGGTGAACTATGCCTGAGCAGGG?CGAAGCCAGAGGAAACTCTGG   [1860]
Micromonas_pus    ??AGATGGTGAACTATG??TGAGCA?GG?CGAAGCCAGAGGAAACTCTGG   [1885]
Mantoniel_squa    ???GATGGTGAACTATG?CTGAGCA?GG?CGAAGCCAGAGGAAACTCTGG   [1860]
Nephroselm_pyr    ???GATGGTGAACTATGCCTGAGCA?GG?CGAAGCCAGAGGAAACTCTGG   [1879]
Pedinomonas_mi    ??AGATGGTGAACTATG?CTGAAC?GGG?TGAAGCCAGGGGAAACT?TGG   [1863]
Tetraselm_cart    ??AGATGGTGAACTATGCCTGAGCA?GG?CGAAGCCAGAGGAAACTCTGG   [1882]
Enteromorpha      TAAGATGGTGAACTATGCCTGA?CA?GG?CGAAGCCAGAGGAAACTCTGG   [1882]
Ulva_fasci        AAAGATGGTGAACTATG?CTGAGCA?GG?CGAAGCCAGAGGAAACTC?GG   [1867]
Ulothrix_zo       ?AAGATGGTGATCTATGCCTGAGCAGGG??GAAGCCAGAGGAAACTCTGG   [1803]
Cympolia_barba    ??AGATGGTGA?CTATACTTGGGTAG?A?TGTAGC?AGGAGAAATTCTGG   [1882]
Batophora_oers    ??AGATGGT???CTATGCTTGGGTAGGA?CGAAG?CTGGGGAAACTCTGA   [1829]
Codium_decort     ??????????????????????????????????????????????????   [1862]
Cladophoro        G??GATGGTGAACTATGCCTGGTGCACGACGAAGCGC??GGAAACGCCGG   [1861]
Blastophysa_rh    ?AAGATGGTGAACTATGCCTGAGCA?GG?CGAAGCCAGAGGAAACTCTGG   [1849]
Trentepohlia      ?AAGATGGTGAACTATGCCTGATCAGG??CGAAGCCAGAGGAAACTCTGG   [1856]
Cephaleuro_par    G??GATGGTGAACTATGCCTGATCAGG??CGAAGCCAGAGGAAACTCTGG   [1870]
Characium_vac     ??????????????????????????????????????????????????   [1838]
Dunaliella_par    ??????????????????????????????????????????????????   [1837]
Chlamyd_reinha    ??????????????????????????????????????????????????   [1840]
Volvox_carteri    ??????????????????????????????????????????????????   [1882]
Chlorococc_min    ??????????????????????????????????????????????????   [1836]
Draparn_plum      AAAGATGGTGAACTATGCCTGAGCGAGG?CGAAGC?AGAGGAAACTCTGG   [1869]
Uronema_belk      ?AAGATGGTGAACTATG?CTGAGCA?GG?CGAAGCCAGAGGAAACTCTGG   [1821]
Chlamydom_moew    ??AGATGGTGAACTATGCCTGGGCAGGG?TGAAGCCAGAGGAAACTCTGG   [1882]
Stephanos_pl      AAAGATGGTGAACTATGCCTGAGCAAGG?TGAAGCCAGAGGAAACTCTGG   [1882]
Carteria_rad      ??AGATGGTGAACTATGCCTGAGCAGGG?TGAAGCCAGAGGAAACTCTGG   [1893]
Gonium_pecto      ?AAGATGGTGAA?TATGCCTGAGCAAGA?TGAAGCCAGAGGAAACTCTGG   [1875]
Chlorella_kess    ??????????????????????????????????????????????????   [1870]
Chlorella_vulg    ??????????????????????????????????????????????????   [1873]
Protothec_wic     ??????????????????????????????????????????????????   [1868]
Chlorella_prot    ??????????????????????????????????????????????????   [1874]
Chlorella_min     ??????????????????????????????????????????????????   [1871]
Neochloris_aqu    ??????????????????????????????????????????????????   [1870]
Neochloris_vig    ??????????????????????????????????????????????????   [1861]
Pediastrum_dup    ??????????????????????????????????????????????????   [1872]
Scenedesm_obl     ??????????????????????????????????????????????????   [1868]
Characium_hin     ??????????????????????????????????????????????????   [1868]
Chlorella_fus     ??????????????????????????????????????????????????   [1869]
Ankistrodesmus    ??????????????????????????????????????????????????   [1866]
Pseudotreb_gig    ???GATGGTG??CTATG?CTGAGC??GG?C?AAGCCAGAGGAAACTCTGG   [1869]
Pleurastr_terr    ??????????????????????????????????????????????????   [1878]
Characium_per     ??????????????????????????????????????????????????   [1871]
Parietochl_pse    ??????????????????????????????????????????????????   [1875]
Friedmannia_is    ??AGATGGTG??CTATGCCTGAGC??GG?CGAAGC?AGAGGA???TCTGG   [1874]

[                          1960      1970      1980      1990      2000]
[                          .         .         .         .         .]

Glycine_max       TGGAGGCCC?GCAGCGATACTGACGTGCAAATCG?TTCGTCTGACTTGGG   [1895]
Oryza_sativa      TGGAGGCTC?GAAGCGATACTGACGTGCAAATCG?TTCGTCTGACTTGGG   [1955]
Zamia_pumila      ??????????????????????????????????????????????????   [1955]
Psilotum_n        ??????????????????????????????????????????????????   [1938]
Equisetum_ar      TGGAGGCTC?GTAGCGATACTGACGTGCAAATCG?TTCGTCAGACTTGGG   [1944]
Atrichum_angus    TGGAGGCTC?G?AGC?ATACTGACGTGCAAATCG?TTCGTCAGACTTGGG   [1916]
Notothylas_bre    TGGAGGCTC?GTAGCGATACTGA?GTGCAAATCG?TTCGTCAGACTTGGG   [1911]
Phaeoceros_lae    TGGAGGCTC?GTAGCGATACTGA?GTGC?AATCG?TTCGTCAGACTTGGG   [1919]
Porella_pi        ??????????????????????????????????????????????????   [1939]
Conocephal_con    TGGAGGCTC?GTAGCGATACTGACGTGCAAATCG?TTC?TCAGACTCGGG   [1896]
Asterella_tene    TGGAGGCTC?GTAGCGATACTGACGTGCAAATCG?TTCGTCAGACTCGGG   [1931]
Riccia            TGGAGGCTC?GTAGCGATACTGACGTGCAAATCG?TTCGTCAGACTTGGG   [1919]
Klebsormid_fla    TGGAGGCTC?G?A?CGATACTGACGTGCAAATCG?TTCGTCAG?CTTGGG   [1957]
Coleochaet_nit    TGGAAGATC?GCAGC?ATACTGACGTGCAAATCG?TTCGTCGGACTTG?G   [1919]
Fissidens_taxi    TGGAGGCTC?GTAGCGATACTGACGTGCAAATCG??T?GT?AGACTTGGG   [1919]
Plagiomnium_cu    TGGAGGCTC?GTAGCGATACTGACGTGCAAATCG?TTCGTCAGACTTGGG   [1910]
Micromonas_pus    TGGAGGCTC?GTAGCGATACTGACGTGC?AATCG?TTCGTCGGACTTGGG   [1935]
Mantoniel_squa    TGGA??CTC?GT?GCGATACTGACGTGC?AATCG?TTCGTCGGACTTGGG   [1910]
Nephroselm_pyr    TGGA??CTC?GTA??G?TACTGACGTGCAAATCG?TTCGTCGGACTTGGG   [1929]
Pedinomonas_mi    TGGAGGCTC?GTAGC?ATACTGACGAGC?AATCG?TTCGT?TGATTTGGG   [1913]
Tetraselm_cart    TGGAGGCTC?GTAGATGTGCT?ACGTGCAAATCG?CTTTTCGGACTTGGG   [1932]
Enteromorpha      TG?AGGCTC?GTAGATGTGCT?ACGTGCAAATCGCCTTTTCGGACTTGGG   [1932]
Ulva_fasci        TGGAGGCTCGG?AGATGTGCT?ACGTGC?AATCG?CTTTTCGGACTTGGG   [1917]
Ulothrix_zo       TGGAGGCTC?GTAGAT?TGCTG?CGTGC?AATCG?CTT?TCGGACTTGG?   [1853]
Cympolia_barba    TGGATGTTC?GAAAGTGTGC?GA?GTGC?AATCG?CTTCTCAAACCTGAG   [1932]
Batophora_oers    TGGAGGTCC?GAAGCT?TGCTGA?GTGCAAATCG?CTTCTCA?ACT?GAG   [1879]
Codium_decort     ??????????????????????????????????????????????????   [1912]
Cladophoro        TGGAGGTCG?G?AGATGTGCT?ACGTGC?AATCG?CTTTTCAGACATGGG   [1911]
Blastophysa_rh    TGGAGGCTC?GTAGATGTGCTGA?GTGCAAAT?G??T?TTCGGACTTGGG   [1899]
Trentepohlia      TGGAGGCTC?GTA?ATGTGCT?ACGTGCAAATCG?CTTTTCGGAATTGG?   [1906]
Cephaleuro_par    TGGAGGCTC?GTAGATGTGCT?ACGTGCAAATCG?CTTTTCGGAATTGGG   [1920]
Characium_vac     ??????????????????????????????????????????????????   [1888]
Dunaliella_par    ??????????????????????????????????????????????????   [1887]
Chlamyd_reinha    ??????????????????????????????????????????????????   [1890]
Volvox_carteri    ??????????????????????????????????????????????????   [1932]
Chlorococc_min    ??????????????????????????????????????????????????   [1886]
Draparn_plum      T??AGGCTC?GTA?ATGTGCTGACGTGC?AATCG?CTTTTCGGACTTGGG   [1919]
Uronema_belk      TGGAGGCTC?GTAGATGTGCTGACGTGCAAATCG?CTTTTCGGACTTGGG   [1871]
Chlamydom_moew    TGGAGGCTC?GTAGATGTGCTGACGTGCAAATCG?CTTTTCTGACCTGGG   [1932]
Stephanos_pl      TGGAGGCCT?GTAGATGTGCTGACGTGCAAATCG?CTTTTCTGACTTGGG   [1932]
Carteria_rad      TGGAGGCTC?GTAGATGTGCTGACGTGCAAATCG?CTTTTCGGACTTGGG   [1943]
Gonium_pecto      TGGAGGTCTGGTAGATGTGCTGACGTGC?AATCG?CTTTTCTGACTTGGG   [1925]
Chlorella_kess    ??????????????????????????????????????????????????   [1920]
Chlorella_vulg    ??????????????????????????????????????????????????   [1923]
Protothec_wic     ??????????????????????????????????????????????????   [1918]
Chlorella_prot    ??????????????????????????????????????????????????   [1924]
Chlorella_min     ??????????????????????????????????????????????????   [1921]
Neochloris_aqu    ??????????????????????????????????????????????????   [1920]
Neochloris_vig    ??????????????????????????????????????????????????   [1911]
Pediastrum_dup    ??????????????????????????????????????????????????   [1922]
Scenedesm_obl     ??????????????????????????????????????????????????   [1918]
Characium_hin     ??????????????????????????????????????????????????   [1918]
Chlorella_fus     ??????????????????????????????????????????????????   [1919]
Ankistrodesmus    ??????????????????????????????????????????????????   [1916]
Pseudotreb_gig    TG?AGGCTC?G?AGATGTGCTGACGTGC??ATCG?CTTTTCGGACTTGGG   [1919]
Pleurastr_terr    ??????????????????????????????????????????????????   [1928]
Characium_per     ??????????????????????????????????????????????????   [1921]
Parietochl_pse    ??????????????????????????????????????????????????   [1925]
Friedmannia_is    TGGAGGCTC?G?AGATGTGCTGACGTGC?AATCG?CTTTTC?GACTTGG?   [1924]

[                          2010      2020      2030      2040      2050]
[                          .         .         .         .         .]

Glycine_max       TATAGGGGCGAAAGACTAATCGAACCGTGCG?GG?GGCCCCGGAAAGAGT   [1945]
Oryza_sativa      TATAGGGGCGAAAGACTAATCGAACCATGCG?GG?GGCCTCGGG?AGAGT   [2005]
Zamia_pumila      ??????????????????????????????????????????????????   [2005]
Psilotum_n        ??????????????????????????????????????????????????   [1988]
Equisetum_ar      TATAGGGGCGAAAGACTAATCGAACCATGCG?GG?GGCCCTGGGAAGAGT   [1994]
Atrichum_angus    ?ATA????C?AAAGACT?ATCGAACCATGCG?AG?GGCCCCGGGAAGAGT   [1966]
Notothylas_bre    TATAGGGGCGAAAG?CTAATCG???????????????CCCCGGG?AGAGT   [1961]
Phaeoceros_lae    TATA?GGGC???AGACTAATCGAACCATGCG??G?GGCCCCGGG?AGAGT   [1969]
Porella_pi        ??????????????????????????????????????????????????   [1989]
Conocephal_con    ?ATA??????AAAGACT?ATCGAACCATGCG?G???GCCCCGGGAAGAGT   [1946]
Asterella_tene    ?ATA??????AAAGACTAATCGAACCATGCG?GA?GGCCCCGGGAAGAGT   [1981]
Riccia            ?ATAG??G??AAAGA?TAATCGAACCATCTAGTA?AGCCCCGGGAAGAGT   [1969]
Klebsormid_fla    ??TA??GCGGAAAGACTAATCGAACCAT???????????????GAAGAGT   [2007]
Coleochaet_nit    TATA????C?AAAGACT?ATC?AACCATGCG?GG?G?CTCCGGG?AGAGT   [1969]
Fissidens_taxi    TATAGGGGC???AGACTAATCGAAC?AT?CG??G?GGCCCCTGGAAGAGT   [1969]
Plagiomnium_cu    TATAGGGGC?AAAGACTAATCGAACCATGCG?AG?GGCCCCTGGAAGAGT   [1960]
Micromonas_pus    TATA???????AAGACT?ATC?AA????GG????GAGCCCCGGG?AGAGT   [1985]
Mantoniel_squa    TATA????C?AAAGACT?ATC?AACCAT?????????????????AGAGT   [1960]
Nephroselm_pyr    TATA?GG?CGAAAGACT?ATC?AACCATGCG?GG?GGCCCCAGGAAGAGT   [1979]
Pedinomonas_mi    ?ATAGGGGCG?AAGACTAATCGAACCAT??????????TCCGG???GAGT   [1963]
Tetraselm_cart    ??TA????CGAAAGACT?ATC?AACCATGCG?AT?GGCCCTGGGAAGAGT   [1982]
Enteromorpha      TATA??GGC?AAAGACTAATCGAACCAT???????GG???TGGAAAGAGT   [1982]
Ulva_fasci        TATA??GG????A?ACT?ATCGAACCATCGA?T??GGC?CTGGAAAGAGT   [1967]
Ulothrix_zo       ?ATAGGGG?G?AAGACT?ATCGAAC?AT?????????CCTT?GGAAGAGT   [1903]
Cympolia_barba    TTTAGGGGC???AGACTAATC?AACCA???????????????????????   [1982]
Batophora_oers    TA?A?GGGC?AAA?ACTAA???????????????????????????????   [1929]
Codium_decort     ??????????????????????????????ACGGCGGCGGCGGG?AGAGT   [1962]
Cladophoro        TATAGGGGC?AAAGACTAATCGAACCAT?GG?CA?TGGTCCGGG?AGAGT   [1961]
Blastophysa_rh    TATA?GGGCGAAAGACT?ATC?AACCAT??????????????GGAAGAGT   [1949]
Trentepohlia      ??CA??G?????A?A??AATCGAACCATGCG?AT?GGTCCCGGGTAGAGT   [1956]
Cephaleuro_par    TGT?????CGAAAGACTAATCGA?CCATGAG?TG?GTC???GGGTAGAGT   [1970]
Characium_vac     ??????????????????????????????????????????????????   [1938]
Dunaliella_par    ??????????????????????????????????????????????????   [1937]
Chlamyd_reinha    ??????????????????????????????????????????????????   [1940]
Volvox_carteri    ??????????????????????????????????????????????????   [1982]
Chlorococc_min    ??????????????????????????????????????????????????   [1936]
Draparn_plum      ?ATA????C???AGA?T?AT??AACCAT??????????????????????   [1969]
Uronema_belk      TATA???GCGAAA?ACT?ATC?AACCATGCA?TC?GGCCCTGGG?AGAGT   [1921]
Chlamydom_moew    CATAGGGGCGAAAGACTAATCGAACCAT?CTAGTA???????????????   [1982]
Stephanos_pl      TATAGGGGCGAA?GACTAATCGAACCAT????????????TGGGAAGAGT   [1982]
Carteria_rad      TATAGGGGCGAAAGACTAATCGAACCATG?T?C??G?CCCCAGGAAGAGT   [1993]
Gonium_pecto      ?ATAGGGG????AGACT?ATCGAACCATGC??TC?GGCCCTGGG?AGAGT   [1975]
Chlorella_kess    ??????????????????????????????????????????????????   [1970]
Chlorella_vulg    ??????????????????????????????????????????????????   [1973]
Protothec_wic     ??????????????????????????????????????????????????   [1968]
Chlorella_prot    ??????????????????????????????????????????????????   [1974]
Chlorella_min     ??????????????????????????????????????????????????   [1971]
Neochloris_aqu    ??????????????????????????????????????????????????   [1970]
Neochloris_vig    ??????????????????????????????????????????????????   [1961]
Pediastrum_dup    ??????????????????????????????????????????????????   [1972]
Scenedesm_obl     ??????????????????????????????????????????????????   [1968]
Characium_hin     ??????????????????????????????????????????????????   [1968]
Chlorella_fus     ??????????????????????????????????????????????????   [1969]
Ankistrodesmus    ??????????????????????????????????????????????????   [1966]
Pseudotreb_gig    ??TA??GGCG??AGACTAATCGAACCAT??????????????GG?AGAGT   [1969]
Pleurastr_terr    ???????????????????????????????????GGCC?TGGG?AGAGT   [1978]
Characium_per     ??????????????????????????????????????????????????   [1971]
Parietochl_pse    ??????????????????????????????????????????????????   [1975]
Friedmannia_is    ??TAGGGGCGAAAGACTCATC?AACCAT??????????????GG?AGAGT   [1974]

[                          2060      2070      2080      2090      2100]
[                          .         .         .         .         .]

Glycine_max       TATCTTTTCTGTTT?AACA?GCCT?GCCC?ACCCTGGAAA?GCCTCAGCC   [1995]
Oryza_sativa      T?TCTTTTCTGCTT?AAC?GGCCC?GCCA?AC?CTGGAAACGGTTCAGCC   [2055]
Zamia_pumila      ??????????????????????????????????????????????????   [2055]
Psilotum_n        ??????????????????????????????????????????????????   [2038]
Equisetum_ar      TCTCTTTTCTTTTT?AACA?ACTT?GCCC?ACCCTGAAATCGGATCAACC   [2044]
Atrichum_angus    TCTCTTTTCT?TTT?AACA?GCCT?GCCT??CCCTGGAATCGGATTACC?   [2016]
Notothylas_bre    TCTC?TTTCTTTTT?AACA?GCCT?GCCT?ACCCTGAAATCGGATTACCC   [2011]
Phaeoceros_lae    TCTCTTTTCT?TTT?AACA???CT?GCCT?GCCCTGAAATCGGATTACCC   [2019]
Porella_pi        ??????????????????????????????????????????????????   [2039]
Conocephal_con    TTTCTTTTCT?TTT??AC?GACCT?GCC??GCCCTGGAATCGCTTTATGC   [1996]
Asterella_tene    TTTCTTTTCT??TT??AC?GACC??GCCG?GCCCTGAAATCGCATTACGC   [2031]
Riccia            TTTCTT?TCTT?TT??AC?GACC??GCC??GCC?TG?AATCGCA?TACGC   [2019]
Klebsormid_fla    TCTCTTTTCTTTTT?AACAGTCC??GCCC?ACCCTGGAATCAGATTAACT   [2057]
Coleochaet_nit    TTT?TTTTCTTTTT?GACA?GTCG??AGC?GCCCTGGAATTGATT?C?CG   [2019]
Fissidens_taxi    TCTCTTTTCT?TTT?AAC?GGCCT?GCCT???CCTGGAATCGGATTACCC   [2019]
Plagiomnium_cu    TCTCT?TTCT?TTT??AC?GGCCC?GACG?ACCCTGGAATCGGTTCACCC   [2010]
Micromonas_pus    TCTCTTTTCTTTTT?A?CA?GCCT??CGC?GCCCTGGAATCGGTTT?GCC   [2035]
Mantoniel_squa    TCTCTTTTCTTTTT??ACA?GCCT?T?GC?GCCCTGGAATCGGTTT?GCC   [2010]
Nephroselm_pyr    TCTCTTTTCTTTTT?AACA?GCCC?GCCC?ACCCTGGAATCGGATTATCC   [2029]
Pedinomonas_mi    T?TCTTTTCTTTTT??ACA?GCCT?GTA??GCCCTGGAATCGGATT?CCC   [2013]
Tetraselm_cart    TCTCTTTTCTTTTT?AACAGGCTC?GAAG?GCCCTGGAATCTAATCATTA   [2032]
Enteromorpha      TCTC?TTTCTTTT??AACA?GCCC?CA?G?ACCCTGGAATCGAGTCATTC   [2032]
Ulva_fasci        TCTCTTTTCTTTTC?AACCAGGGG??A?G?A?CCTGGAATCGAGTC?TTC   [2017]
Ulothrix_zo       TCTCTTTTCTTTTT?AA?A?GCC???A?G?ACCC?GG?ATCG?GTC?TTC   [1953]
Cympolia_barba    ??????????????????????????????????????????????????   [2032]
Batophora_oers    ??????????????????????????????????????????????????   [1979]
Codium_decort     TCTCTTTTCTTGTT?GACGAGCT??AAGG?ACCCTGGAA?C???TC??CG   [2012]
Cladophoro        TGTCTTTTCTTTTT?AACA?GCTC?GCA???CCCTGGAATCAGATTATCT   [2011]
Blastophysa_rh    TCTCTTTTCTTCTT?GA?GA?CCC?GAAG??CCCTGGAATCGGATCATCC   [1999]
Trentepohlia      TATCTTTTCTACTT?AACGA?CCC?GAAG?GCCCT?GAATCGGATCATCC   [2006]
Cephaleuro_par    T?TCTTTTCTGCTT?AACGAGCCC?GAAG?GC?CTGGAATCGGATCATCC   [2020]
Characium_vac     ??????????????????????????????????????????????????   [1988]
Dunaliella_par    ??????????????????????????????????????????????????   [1987]
Chlamyd_reinha    ??????????????????????????????????????????????????   [1990]
Volvox_carteri    ??????????????????????????????????????????????????   [2032]
Chlorococc_min    ??????????????????????????????????????????????????   [1986]
Draparn_plum      ??????????????????????????????????????????????????   [2019]
Uronema_belk      TCTCTTTTCTTTTT?AAC?AGCT??GAAG?GCCCTGGAATCGAATCATTC   [1971]
Chlamydom_moew    ????????????????CACCGCTC?GAAA?GCCCTGGAATCG?AT?ATTC   [2032]
Stephanos_pl      TCTCTTTTCT?TTT?AAC?AGC?CGGAAG?GCCCTGGAATCGAATC?TTC   [2032]
Carteria_rad      TCTCTTTTCTTTTTCAAC?A?C?C?GAAG?GCCCTGGAATCGAAT??TTC   [2043]
Gonium_pecto      TCTCTTTTCT?TTT?AAC?A?CCC?GAAG?GC?CTGGAATCGAAT??TTC   [2025]
Chlorella_kess    ??????????????????????????????????????????????????   [2020]
Chlorella_vulg    ??????????????????????????????????????????????????   [2023]
Protothec_wic     ??????????????????????????????????????????????????   [2018]
Chlorella_prot    ??????????????????????????????????????????????????   [2024]
Chlorella_min     ??????????????????????????????????????????????????   [2021]
Neochloris_aqu    ??????????????????????????????????????????????????   [2020]
Neochloris_vig    ??????????????????????????????????????????????????   [2011]
Pediastrum_dup    ??????????????????????????????????????????????????   [2022]
Scenedesm_obl     ??????????????????????????????????????????????????   [2018]
Characium_hin     ??????????????????????????????????????????????????   [2018]
Chlorella_fus     ??????????????????????????????????????????????????   [2019]
Ankistrodesmus    ??????????????????????????????????????????????????   [2016]
Pseudotreb_gig    TCTCTTTTCT?TTT??AC?AGCT??GAAG?GCCCTGGAATCGGCT?ATCC   [2019]
Pleurastr_terr    TCTCTTTTCT?TTT??AC?AGC?C?GAAG?GCCCTGGAATCGAATC??TC   [2028]
Characium_per     ??????????????????????????????????????????????????   [2021]
Parietochl_pse    ??????????????????????????????????????????????????   [2025]
Friedmannia_is    TCTCTTTTCTTCTT?AACAA?CCC?GAAG?G?CCTGGAATCGGCTCATCC   [2024]

[                          2110      2120      2130      2140      2150]
[                          .         .         .         .         .]

Glycine_max       GGAG??GTAGGGTCCAGCGGCTGGA?AGAGCACCGCACGTCGCGTGGTGT   [2045]
Oryza_sativa      GGAG??GTAGGGTCCAGCGGC?GGAGAGA???GCACACGTCGCGCGGTGT   [2105]
Zamia_pumila      ??????????????????????????????????????????????????   [2105]
Psilotum_n        ??????????????????????????????????????????????????   [2088]
Equisetum_ar      GGAG??ATAGGGTCCAGCGGTTGGT?AAAGCA?CGCAGGTC?TGCGGTGT   [2094]
Atrichum_angus    GGAG??ATAGGGTCCAGCGGCTGGT?AAAGCACCGCAC?TCTTGCGG?GT   [2066]
Notothylas_bre    GGAG??ATAGGGTCCAGCGGCTGGT?AAAGCACCACACG?CTTGCGGTGT   [2061]
Phaeoceros_lae    GGA???ATAGGGTCCAGCGGCTGGT?AAAGCACCACACGTCTTGCGGTGT   [2069]
Porella_pi        ??????????????????????????????????????????????????   [2089]
Conocephal_con    GGAG??ATAGGGCCCAGCGGTCGGT?AAAGCGTCGCAAGTCTTGCGG?GT   [2046]
Asterella_tene    GGAG??ATAGGGCCCAGCGGTCGGC?AAAGCGTCGCA?GTCTTGCGG?GT   [2081]
Riccia            ?GAG??ATAGGGCCCA?CGGTCGGC?AAAGCGTCGCA??TCT??CGGCGT   [2069]
Klebsormid_fla    GGAG??ATAGGGTCCAGCGACTGGG?AAAGCATCGCACGTCTCGCGGTGT   [2107]
Coleochaet_nit    GCG???GAGGGTGC?GAAAGCTGGC?AGAGCGCGCACTGGT???CGGTGT   [2069]
Fissidens_taxi    GGAG??ATAGGGTCCAGCGGCCGGT?AAAG???CGCACGTCTTGCGG?GT   [2069]
Plagiomnium_cu    GGAG??ATAGGGTCCAGCGGCCGGT?AAAGCACCGCACGTCTCGCGGTGT   [2060]
Micromonas_pus    GGAG??ATA?GGCCCAACGGCTGGT?AAAGCACTGCACGT?TCGCAGTGT   [2085]
Mantoniel_squa    GGAG??ATA?GGCCCAACGGCTGGT?AAAGCACTGCA?GT??CGCAGTGT   [2060]
Nephroselm_pyr    GGAG??ATA?GGCCCAGCGGCTGGT?AAAG?C?CACT?CTTGCGG?GT??   [2079]
Pedinomonas_mi    GGA???ATAGGGTGATGTGGCTGGT?AAAGCACCTCACGTCTTGAGGTGT   [2063]
Tetraselm_cart    GGAG??ATAGGGCTCAGAAGTCGGT?AAAGCACCGCACGTC?CGCGG?GT   [2082]
Enteromorpha      GGAG??ATAGGGTTCAGTGCCTGGT?AAAGCACA??TC?T?T???GGTGT   [2082]
Ulva_fasci        GGAG??ATAGGGTTC?GTGCCTGGT??AAGCACCACACGTCTCGTGGTGT   [2067]
Ulothrix_zo       GGAG??ATAGGGTTCAGTGGCTGGT??AAGCATCGCACGTCT?GCGGT?T   [2003]
Cympolia_barba    ??????????????????????????????????????????????????   [2082]
Batophora_oers    ??????????????????????????????????????????????????   [2029]
Codium_decort     GGA???ATAGGGTTTGACGGCAGGT??T?GCGCCGCCCC??G?TGCGC?G   [2062]
Cladophoro        G?AG??AT?AGGGCTCAGAGCTGGT?AAAGCGTTGCAA??CTCGCAACGT   [2061]
Blastophysa_rh    GGAG??ATAGGCCCAT?TGGTCGGT?AAAGCACCGCACGT?T?GCGGTGT   [2049]
Trentepohlia      GGAG??ATAGGGCTCAGAGGTCGGT?ACAAGCGCCGCACATCACGTGCGT   [2056]
Cephaleuro_par    GGAG??ATAGGGCTCAGAGGTGGGT??AGAGCGCCGCACATCACGTGC?T   [2070]
Characium_vac     ??????????????????????????????????????????????????   [2038]
Dunaliella_par    ??????????????????????????????????????????????????   [2037]
Chlamyd_reinha    ??????????????????????????????????????????????????   [2040]
Volvox_carteri    ??????????????????????????????????????????????????   [2082]
Chlorococc_min    ??????????????????????????????????????????????????   [2036]
Draparn_plum      ??????????????????????????????????????????????????   [2069]
Uronema_belk      GGA???ATAGGGCTCAGCA?CTGGT?AAAGCACCGCACGTCTCGCGGTGT   [2021]
Chlamydom_moew    GGAG??ATCGGGCTT?GCCGCTGGG?AAAGCCTCT?AGTTTTGA?GGTGT   [2082]
Stephanos_pl      GGAG?AGTAGGGCCCAGCAGCTGGT?AAAGCACCGCACTTCTCGTGGTGT   [2082]
Carteria_rad      GGAG??ATAGGGCTCAGAGGCTGGT??AAGCACCGCACTT?TCGCGGTGT   [2093]
Gonium_pecto      GGAG??ATAGGGCTCAGAGGTTGGT?AAAGCACCGCAGTTCTCGCGGTGT   [2075]
Chlorella_kess    ??????????????????????????????????????????????????   [2070]
Chlorella_vulg    ??????????????????????????????????????????????????   [2073]
Protothec_wic     ??????????????????????????????????????????????????   [2068]
Chlorella_prot    ??????????????????????????????????????????????????   [2074]
Chlorella_min     ??????????????????????????????????????????????????   [2071]
Neochloris_aqu    ??????????????????????????????????????????????????   [2070]
Neochloris_vig    ??????????????????????????????????????????????????   [2061]
Pediastrum_dup    ??????????????????????????????????????????????????   [2072]
Scenedesm_obl     ??????????????????????????????????????????????????   [2068]
Characium_hin     ??????????????????????????????????????????????????   [2068]
Chlorella_fus     ??????????????????????????????????????????????????   [2069]
Ankistrodesmus    ??????????????????????????????????????????????????   [2066]
Pseudotreb_gig    GGAG??A?AGGGCCCA?AAGCTGGT??AAGCACTGCACTTCTCGGCAGTG   [2069]
Pleurastr_terr    GGAG??A?AGGGCTCAGAAGCTGGT?AAAG??C?GCA?GTCT?GCGGT?G   [2078]
Characium_per     ??????????????????????????????????????????????????   [2071]
Parietochl_pse    ??????????????????????????????????????????????????   [2075]
Friedmannia_is    GGAG??ATAGGGCTC?GAGGTT?GT?AAAGCACTGCACT????GCAGT?T   [2074]

[                          2160      2170      2180      2190      2200]
[                          .         .         .         .         .]

Glycine_max       CCGGTGCCCC?C???GGC??GGCCCTTGA231011000110000001027
Oryza_sativa      CCGGTGCCCC?C???GGC??GGCCCTTGA231011000110000001027
Zamia_pumila      ?????????????????????????????231011000110000001027
Psilotum_n        ?????????????????????????????231011000110000001027
Equisetum_ar      CCGGTGCCCC?C???GGC??GGCCCTTGA231011000110000001027
Atrichum_angus    CCGGGGCCC??C???GGC??GGCCCGTGA231011000110000001027
Notothylas_bre    CCGGTG?CCC?????GGC??GGCCCGTG?231011000110000001027
Phaeoceros_lae    CCGGTGGCCC?CT??GGC??GGCCCGTGA231011000110000001027
Porella_pi        ?????????????????????????????231011000110000001027
Conocephal_con    CCGGTGCGCC?CCC?GAC??GGTCC??GA231011000110000001027
Asterella_tene    CCGGTG?GCC?CCC?GAC??GGCCCC?GA231011000110000001027
Riccia            CCGGTGCTCATCCCCTAAAA?CCAG?AGA231011000110000001027
Klebsormid_fla    CTGGTGCGCC?CT??GAC??GGCCCTTGA00001?000101001000001
Coleochaet_nit    C?GGTG?AC??CCG???T??T?CCCTAGA001011000111001001021
Fissidens_taxi    CAGGTGCCCT?C???GGC??GGCCCT?GA231011000110000001027
Plagiomnium_cu    CAGGTGGCCC?TC??GGC??GGCCCGTGA231011000110000001027
Micromonas_pus    CCGGTGC?CT?CC??GG???GGCCC?TGA1?000000000000101?0?0
Mantoniel_squa    CCGGTGCACT?CCC?GAC??GGCCC???A1?000000000000101?0?0
Nephroselm_pyr    CTGGTGCGCC?CTC?GAC??GGCCC??G?1?000000000000101?0?0
Pedinomonas_mi    ?C?GTGC?TC?TC???AC???C??CTTGA1?000000000000101?0?0
Tetraselm_cart    CCGGAGCGCC?ATT?GAC??GATCCTTGA1?000000000000101?0?0
Enteromorpha      CCGGCGCGCA?GTC?GAGTCGGTCCGTGA121011001000001000116
Ulva_fasci        CCGGCGCGCC?A?C?GA???GGTCCGTGA121011001000001000116
Ulothrix_zo       CTGGAGCGCT?ACC?A?C???GTCCTTGA031011000001001000106
Cympolia_barba    ?????????????????????????????111111110003000001117
Batophora_oers    ?????????????????????????????111111000?02001001107
Codium_decort     TCTGGCCC?C???C??????GGCGGTCC?111011110003000001117
Cladophoro        CCCGAGCGCC?TC??CAC??GGCCCTTAA12101110000200100110?
Blastophysa_rh    ???ACGTTGC??????A????CCCCTTAA12101110010200100110?
Trentepohlia      CCGGTGCGCC?ATC?GAC??GGTCCT???221011000102001001101
Cephaleuro_par    CGG?TGCGCC?ATC??AC????TCC???A221011000102001001101
Characium_vac     ?????????????????????????????00100000000001100010?
Dunaliella_par    ?????????????????????????????100000000000001010000
Chlamyd_reinha    ?????????????????????????????000000000000001010100
Volvox_carteri    ?????????????????????????????00002000000000011112?
Chlorococc_min    ?????????????????????????????00000000000000100010?
Draparn_plum      ?????????????????????????????001011000102101000106
Uronema_belk      ?C?GCGCGC??GAT?GA???GGTCC?TGA001011000101101000106
Chlamydom_moew    CCCGTGCGCC?GAT??AC??GATCCTT?A000000000000001010100
Stephanos_pl      CCGGCGCGCT?AGT?CAC??GGTCCGTGA000020000000000110102
Carteria_rad      CTGGCGCGTC?GAC?GAC??GGTCCTT?A000000000000001010100
Gonium_pecto      CCGGCGCGC??GTT?GA????GTCC??GA000020000000000110100
Chlorella_kess    ?????????????????????????????00000000000000010?1??
Chlorella_vulg    ?????????????????????????????00000000000000010?1?0
Protothec_wic     ?????????????????????????????00000000000000010?1??
Chlorella_prot    ?????????????????????????????00000000000000010?1??
Chlorella_min     ?????????????????????????????00000000000000010?1??
Neochloris_aqu    ?????????????????????????????00000010000000100010?
Neochloris_vig    ?????????????????????????????00000010000000100010?
Pediastrum_dup    ?????????????????????????????00002100000000100010?
Scenedesm_obl     ?????????????????????????????00002100000000010010?
Characium_hin     ?????????????????????????????00100010000001100010?
Chlorella_fus     ?????????????????????????????00000000000000010?1?0
Ankistrodesmus    ?????????????????????????????00000000000001010?1??
Pseudotreb_gig    TCCGGAGCCC?ACC?GAC??GGCCC?TGA00000000000000200?0??
Pleurastr_terr    TC?GCGCGC??GAT??AC??GGTCC?TGA00001100000100200?0??
Characium_per     ?????????????????????????????00100000000001100010?
Parietochl_pse    ?????????????????????????????00000000000000100010?
Friedmannia_is    CCGGAGCGCC?ATT?GAG?CGGCCCTTGA{02}000000000000020000??

[                          2210      2220      2230      2240      2250]
[                          .         .         .         .         .]

Glycine_max       0??0????0??010000110????0??10100??300000?000??0000
Oryza_sativa      0??0????0??010000110????0??10100??300000?000??0000
Zamia_pumila      0??0????0??010000110????0??10100?0300000?000000000
Psilotum_n        0??0????0??010000110????0??10100??300000?000??0000
Equisetum_ar      0??0????0??010000110????0??10100?0300000?000000000
Atrichum_angus    0??0?0?10??010000110????0??101000?300000?000000000
Notothylas_bre    1??000?10?1010000110????0??1010000300000?000000000
Phaeoceros_lae    1??000?10?1010000110????0??1010000300000?000000000
Porella_pi        0??000?10?1010000110????0??1010000300000?000000000
Conocephal_con    0??000?10?1010000110????0??1010000300000?000000000
Asterella_tene    0??000?10?1010000110????0??1010000300000?000000000
Riccia            0??00??10?1010000110????0??1010000300000?000000000
Klebsormid_fla    10000001001010000010????0??1110000?00?000000000000
Coleochaet_nit    10000001001010000110????0??1110000?00000?001000000
Fissidens_taxi    0??000?10?1010000110????0??1010000300000?000000000
Plagiomnium_cu    0??000?10?1010000110????0??1010000300000?000000000
Micromonas_pus    1021?000???01100000?????0???100000300000?000110000
Mantoniel_squa    1021000000101100000?????0?1?100001300000?001110000
Nephroselm_pyr    100101001?101100000?????0???100000210000?001101000
Pedinomonas_mi    1021?0?01??01100000?????0???100001200000?000001000
Tetraselm_cart    10112110100001111000????0???1000010100000000100000
Enteromorpha      10101100101011000000????0?0011010??100000110101010
Ulva_fasci        10101100101011000000??1?0?0011010??100000110101010
Ulothrix_zo       10101100101011000000?0??0?00110101010000?011101010
Cympolia_barba    10?0?10?1??011000000???????010000?310100?000???1?0
Batophora_oers    1??0110?101011000000???????0100001310100?0?0001110
Codium_decort     10401100101011000000????1?1010000?310000?000???0?0
Cladophoro        101011001??011000000????0?0011000??10010?0?0???0?0
Blastophysa_rh    10101100101011000000????1?1011000?310?10?00000?01?
Trentepohlia      0?101100101011000?0?????0??0110000?11001?0???000?1
Cephaleuro_par    0?101100101011000?0?????0??0110000?11001?0??0000?1
Characium_vac     1100?10011001110100?????0??010001??10000?00010?010
Dunaliella_par    1101?1?01100?????00?????0???10000?310000?000???010
Chlamyd_reinha    11000100110011101001??1?0?011000110100001000101010
Volvox_carteri    1?0???1011001110?00?????0???10101??10000?000???010
Chlorococc_min    1100?10011001110100?????0??010001??10000?000100010
Draparn_plum      10101100110011101010?1??0??11101010100001000101010
Uronema_belk      10101100110011101010?1??0??1110101010000?000101010
Chlamydom_moew    1?0001?01100?????00?????0??1100111010000?000???010
Stephanos_pl      1101011011001110100?????0??1101111110000?000??1010
Carteria_rad      111001001100?????00?????0??1100111010000?00010?010
Gonium_pecto      110?211011001110100?????0??1101011010000?000101010
Chlorella_kess    1??0???????????0100?0?1000??1000??3?000????0???0?0
Chlorella_vulg    1??0???????????0100?1?0000??1000??3?000?1??0???0?0
Protothec_wic     1??0???????????0100?????0???1000??3?000????0???0?0
Chlorella_prot    1??0???????????0100?1?0000??1000??3?000????0???0?0
Chlorella_min     1??0???????????0100?0?0000??1000??3?000????0???0?0
Neochloris_aqu    1000?10012011110100?????0??010000??10000?000101010
Neochloris_vig    1000??0012011110100?????0??010000??10000?00010?010
Pediastrum_dup    1?001100120111101001????0??1100001?10000?010101010
Scenedesm_obl     1?40???0????1110100???1101??10000???00001000???0?0
Characium_hin     1000?100120?1110100?????0??010000??10000?00010?010
Chlorella_fus     1??0???????????0100?1?1101??1000??3?000????0???0?0
Ankistrodesmus    1??0???????????0100?????0???1000??3?000????0???0?0
Pseudotreb_gig    1000?10010?001111000????0???10000?310000?000100010
Pleurastr_terr    1000?10010?001111000????0???10000?310000?000100010
Characium_per     1100?1001010?11?000?????0??010000??10000?00010?010
Parietochl_pse    1100?1001010?11?000?????0??010000??10000?200100010
Friedmannia_is    10001100101001111000????0???10000?310000?000100010

[                          2260      2270      2280      ]
[                          .         .         .         ]

Glycine_max       ?1111111??11?00011001111000011111111111
Oryza_sativa      ?1111111??11?00011001111000011111111111
Zamia_pumila      111111111111?00011001111000011111111100
Psilotum_n        111111111111?00011001111000011111000000
Equisetum_ar      111111111111?00011001111000011110000000
Atrichum_angus    111110111111?00011001111111000000000000
Notothylas_bre    111110111111000011110000100000000000000
Phaeoceros_lae    111110111111000011110000100000000000000
Porella_pi        111111111111111100000000000000000000000
Conocephal_con    111111111111111100000000000000000000000
Asterella_tene    111111111111111100000000000000000000000
Riccia            111111111111111100000000000000000000000
Klebsormid_fla    ?100000000000000?0000000000000000000000
Coleochaet_nit    1111001100000000?0000000000000000000000
Fissidens_taxi    111111111111000011001111111100000000000
Plagiomnium_cu    111111111111000011001111111100000000000
Micromonas_pus    ?00000000000000000000000000000000000000
Mantoniel_squa    000000000000000000000000000000000000000
Nephroselm_pyr    000000000000000000000000000000000000000
Pedinomonas_mi    000000000000000000000000000000000000000
Tetraselm_cart    000000000000000000000000000000000000000
Enteromorpha      0?0000000000000000000000000000000000000
Ulva_fasci        0?0000000000000000000000000000000000000
Ulothrix_zo       000000000000000000000000000000000000000
Cympolia_barba    000000000000000000000000000000000000000
Batophora_oers    000000000000000000000000000000000000000
Codium_decort     000000000000000000000000000000000000000
Cladophoro        000000000000000000000000000000000000000
Blastophysa_rh    000000000000000000000000000000000000000
Trentepohlia      1?0010000000000000000000000000000000000
Cephaleuro_par    1?0010000000000000000000000000000000000
Characium_vac     0?0000000000000000000000000000000000000
Dunaliella_par    000000000000000000000000000000000000000
Chlamyd_reinha    000000000000000000000000000000000000000
Volvox_carteri    0?0000000000000000000000000000000000000
Chlorococc_min    0?0000000000000000000000000000000000000
Draparn_plum      0?0000000000000000000000000000000000000
Uronema_belk      0?0000000000000000000000000000000000000
Chlamydom_moew    0?0000000000000000000000000000000000000
Stephanos_pl      0?0000000000000000000000000000000000000
Carteria_rad      0?0000000000000000000000000000000000000
Gonium_pecto      0?0000000000000000000000000000000000000
Chlorella_kess    ??0000000000000000000000000000000000000
Chlorella_vulg    ?00000000000000000000000000000000000000
Protothec_wic     ??0000000000000000000000000000000000000
Chlorella_prot    ??0000000000000000000000000000000000000
Chlorella_min     ??0000000000000000000000000000000000000
Neochloris_aqu    0?0000000000000000000000000000000000000
Neochloris_vig    0?0000000000000000000000000000000000000
Pediastrum_dup    0?0000000000000000000000000000000000000
Scenedesm_obl     000000000000000000000000000000000000000
Characium_hin     0?0000000000000000000000000000000000000
Chlorella_fus     ??0000000000000000000000000000000000000
Ankistrodesmus    ??0000000000000000000000000000000000000
Pseudotreb_gig    0?0000000000000000000000000000000000000
Pleurastr_terr    0?0000000000000000000000000000000000000
Characium_per     0?0000000000000000000000000000000000000
Parietochl_pse    0?0000000000000000000000000000000000000
Friedmannia_is    000000000000000000000000000000000000000
;
END;


BEGIN CODONS;
GENCODE UNIVNUC
;
END;

BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;

	EXSET  gaps+unalignsites  =  50-55 110-122 171-176 214-220 228-232 267-280 482-489 657-663 676-690 699-713 729-731 737-743 782-785 1362-1391 1416-1429 1691-1695 1709-1755;
	EXSET  LSU  =  50-55 110-122 171-176 214-220 228-232 267-280 482-489 657-663 676-690 699-713 729-731 737-743 782-785 1362-1391 1416-1429 1691-1695 1709-1755 1834-2179;
	EXSET  SSU  =  1-1833;
EXSET MOLECULES = 1-2179;
EXSET MORPHOLOGY = 2180-2289;


END; 



BEGIN MACCLADE;
v 3.0
-1471374107
1000&/0
0
0
END;
